9JY1 image
Deposition Date 2024-10-12
Release Date 2025-10-22
Last Version Date 2025-11-05
Entry Detail
PDB ID:
9JY1
Keywords:
IMMUNE SYSTEM
Title:
delta epsilon/delta epsilon Fab-TCR tetramer
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Homo sapiens
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.08 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
9JY1 validation report
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Fab light chain
Chain IDs:B (auth: O), L (auth: Q)
Chain Length:212
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Fab heavy chain
Chain IDs:A (auth: P), K (auth: R)
Chain Length:222
Number of Molecules:2
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:T-cell surface glycoprotein CD3 zeta chain
Gene (Uniprot):CD247
Chain IDs:C (auth: a), D (auth: b), M (auth: A), N (auth: B)
Chain Length:166
Number of Molecules:4
Biological Source:Homo sapiens
UniProt ID:P20963 Pfam ID:PF11628, PF02189
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:T-cell surface glycoprotein CD3 delta chain
Gene (Uniprot):CD3D
Chain IDs:E (auth: d), O (auth: D)
Chain Length:171
Number of Molecules:2
Biological Source:Homo sapiens
UniProt ID:P04234 Pfam ID:PF16680, PF02189
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:T-cell surface glycoprotein CD3 epsilon chain
Gene (Uniprot):CD3E
Chain IDs:F (auth: e), G (auth: f), P (auth: E), Q (auth: F)
Chain Length:207
Number of Molecules:4
Biological Source:Homo sapiens
UniProt ID:P07766 Pfam ID:PF16681, PF02189
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:T-cell surface glycoprotein CD3 gamma chain
Gene (Uniprot):CD3G
Chain IDs:H (auth: g), R (auth: G)
Chain Length:182
Number of Molecules:2
Biological Source:Homo sapiens
UniProt ID:P09693 Pfam ID:PF16680, PF02189
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:T cell receptor delta variable 2,T cell receptor delta constant
Chain IDs:I (auth: m), S (auth: M)
Chain Length:292
Number of Molecules:2
Biological Source:Homo sapiens
UniProt ID:B7Z8B9 Pfam ID:PF07686, PF07654
Protein Blast
Polymer Type:polypeptide(L)
Molecule:T cell receptor gamma variable 9,T cell receptor gamma constant 1
Gene (Uniprot):TRGC1, TRGV9
Chain IDs:J (auth: n), T (auth: N)
Chain Length:315
Number of Molecules:2
Biological Source:Homo sapiens
UniProt ID:Q99603,P0CF51 Pfam ID:PF07686, PF07654
Ligand Molecules
NAG
Primary Citation
Structures of the apo and agonist-crosslinked human gamma delta T-cell receptor
To Be Published ? ? ? (?)
Primary Citation of related structures
9JY1