9JWD image
Entry Detail
PDB ID:
9JWD
Keywords:
Title:
Crystal structure of RNAs A treated with sodium cyanide
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2024-10-10
Release Date:
2024-12-04
Method Details:
Experimental Method:
Resolution:
2.22 Å
R-Value Free:
0.25
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 32 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Ribonuclease pancreatic
Chain IDs:A
Chain Length:124
Number of Molecules:1
Biological Source:Bos taurus
Primary Citation
Cyanide mediated conformational changes resulted in the displacement of sulfate ion from the active site of bovine pancreatic ribonuclease A.
Biochem.Biophys.Res.Commun. 736 150868 150868 (2024)
PMID: 39490154 DOI: 10.1016/j.bbrc.2024.150868

Abstact

Ribonuclease A is a major hydrolyzing enzyme involved in the hydrolysis of RNA. The crystals of bovine pancreatic RNase A (bpRNase A) were grown at pH 5.5. The effect of sodium cyanide on bpRNase A was assessed by adding it directly to the crystal containing well. Treating the crystals of bpRNase A with sodium cyanide resulted in the displacement of the sulfate ion from the active site of bpRNase A, while the additional sulfate ion, bound to Ala-4, remained unaffected. The addition of sodium cyanide to bpRNase A crystals did not show change in the secondary structure elements of the enzyme. This study was conducted to check the effect of cyanide on bpRNase A crystals and to displace sulfate ion from its active site.

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