9JVS image
Deposition Date 2024-10-09
Release Date 2026-01-14
Last Version Date 2026-02-18
Entry Detail
PDB ID:
9JVS
Keywords:
Title:
Co-crystal structure of PHBDD-M1 with 4-formyl-N-methylbenzamide
Biological Source:
Source Organism(s):
Expression System(s):
Method Details:
Experimental Method:
Resolution:
1.93 Å
R-Value Free:
0.20
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
I 41 2 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:4-hydroxybenzaldehyde dehydrogenase (NADP(+))
Gene (Uniprot):pchA
Chain IDs:A
Chain Length:493
Number of Molecules:1
Biological Source:Pseudomonas putida
Primary Citation
Engineered aldehyde dehydrogenases for amide bond formation.
Science 391 ? ? (2026)
PMID: 41610224 DOI: 10.1126/science.adw3365

Abstact

Amide bond formation is widely used in pharmaceutical synthesis, typically involving stoichiometric coupling reagents to activate carboxylic acid substrates for a condensation reaction. As an alternative approach, we repurposed aldehyde dehydrogenases into oxidative amidases by creating a more hydrophobic and spacious catalytic pocket for amines to capture the thioester intermediate. This biocatalyst efficiently facilitates the formation of amide bonds between diverse aldehydes and amines. We also developed a two-step enzymatic cascade to synthesize amides from broadly available aliphatic alcohols. This biocatalytic strategy enabled the redesign of synthetic routes for five drug molecules. Our findings highlight the potential of oxidative amidases in advancing the synthesis of structurally diverse drug molecules through efficient amide bond formation.

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Primary Citation of related structures
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