9JSV image
Deposition Date 2024-10-01
Release Date 2024-10-09
Last Version Date 2025-07-16
Entry Detail
PDB ID:
9JSV
Title:
G175S mutant native PMEL amyloid
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
1.79 Å
Aggregation State:
FILAMENT
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:M-alpha
Gene (Uniprot):PMEL
Chain IDs:A, B (auth: E), C (auth: B), D (auth: F), E (auth: C), F (auth: G), G (auth: D), H
Chain Length:34
Number of Molecules:8
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Cryo-EM of wild-type and mutant PMEL amyloid cores reveals structural mechanism of pigment dispersion syndrome.
Nat Commun 16 5411 5411 (2025)
PMID: 40595665 DOI: 10.1038/s41467-025-61233-y

Abstact

PMEL amyloids serve as essential scaffolds for melanin deposition in melanosomes, playing a crucial role in pigmentation. Despite their importance, the high-resolution structure of PMEL amyloids has remained unresolved. Using cryo-electron microscopy, we determine near-atomic resolution structures of wild-type PMEL amyloid core, revealing two distinct polymorphic forms with structural features. We further investigate the pathogenic G175S mutation associated with pigment dispersion syndrome (PDS). Structural analysis reveales that G175S introduces an additional hydrogen bond, stabilizing an alternative fibril conformation. In vitro, the G175S mutant exhibits a fourfold increase in polymerization efficiency compared to the wild type. In cells, G175S expression resultes in a twofold increase in intracellular amyloid content and a ~70% increase in extracellular amyloids, without altering melanosome morphology or number. These results indicate that the G175S mutation enhances amyloidogenesis within melanosomes, elevating amyloid load and potentially contributing to PDS pathophysiology. This study provides molecular insights into PMEL amyloid formation, highlighting its structural diversity and dysregulation in pigmentation disorders.

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Primary Citation of related structures