9JJE image
Entry Detail
PDB ID:
9JJE
EMDB ID:
Title:
Nematostella vectensis TRPM2 tetramer in complex with ADPRP/Ca2+
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2024-09-13
Release Date:
2024-11-06
Method Details:
Experimental Method:
Resolution:
2.52 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Transient receptor potential cation channel subfamily M member-like 2
Chain IDs:A, B, C, D
Chain Length:1560
Number of Molecules:4
Biological Source:Nematostella vectensis
Primary Citation
A conserved mechanism couples cytosolic domain movements to pore gating in the TRPM2 channel.
Proc.Natl.Acad.Sci.USA 121 e2415548121 e2415548121 (2024)
PMID: 39514307 DOI: 10.1073/pnas.2415548121

Abstact

Transient Receptor Potential Melastatin 2 (TRPM2) cation channels contribute to immunocyte activation, insulin secretion, and central thermoregulation. TRPM2 opens upon binding cytosolic Ca2+ and ADP ribose (ADPR). We present here the 2.5 Å cryo-electronmicroscopy structure of TRPM2 from Nematostella vectensis (nvTRPM2) in a lipid nanodisc, complexed with Ca2+ and ADPR-2'-phosphate. Comparison with nvTRPM2 without nucleotide reveals that nucleotide binding-induced movements in the protein's three "core" layers deconvolve into a set of rigid-body rotations conserved from cnidarians to man. By covalently crosslinking engineered cysteine pairs we systematically trap the cytosolic layers in specific conformations and study effects on gate opening/closure. The data show that nucleotide binding in Layer 3 disrupts inhibitory intersubunit interactions, allowing rotation of Layer 2 which in turn expands the gate located in Layer 1. Channels trapped in that "activated" state are no longer nucleotide dependent, but are opened by binding of Ca2+ alone.

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