9JDI image
Deposition Date 2024-08-31
Release Date 2025-09-03
Last Version Date 2025-10-22
Entry Detail
PDB ID:
9JDI
Keywords:
ANTIMICROBIAL PROTEIN
Title:
Crystal structure of the type VI secretion system effector-immunity complex BtpeA CTD-BtpiA from Bacteroides fragilis.
Biological Source:
Source Organism:
Bacteroides fragilis (Taxon ID: 817)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.11 Å
R-Value Free:
0.21
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
C 1 2 1
9JDI validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:DUF3289 family protein
Gene (Uniprot):FSA03_13565, FSA06_12460, NXX45_13955
Chain IDs:A
Chain Length:360
Number of Molecules:1
Biological Source:Bacteroides fragilis
UniProt ID:A0A5C6JKA9 Pfam ID:PF11692
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:BtpiA
Gene (Uniprot):FSA03_13570, FSA06_12455, NXX45_13950
Chain IDs:B (auth: C)
Chain Length:182
Number of Molecules:1
Biological Source:Bacteroides fragilis
UniProt ID:A0A5C6HE89
Ligand Molecules
GOL
Primary Citation
A conserved adaptor orchestrates co-secretion of synergistic type VI effectors in gut Bacteroidota.
Cell Host Microbe ? ? ? (2025)
PMID: 41072405 DOI: 10.1016/j.chom.2025.09.012
Primary Citation of related structures
9JDI