9J9I image
Deposition Date 2024-08-22
Release Date 2025-06-04
Last Version Date 2025-08-27
Entry Detail
PDB ID:
9J9I
Keywords:
RIBOSOME
Title:
High-resolution cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to E-tRNA
Biological Source:
Source Organism:
Plasmodium falciparum 3D7 (Taxon ID: 36329)
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
2.46 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
9J9I validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L24, putative
Gene (Uniprot):PF3D7_1309100
Chain IDs:L (auth: 0)
Chain Length:162
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8IEM3 Pfam ID:PF01246
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L27
Gene (Uniprot):PF3D7_1460700
Chain IDs:O (auth: 1)
Chain Length:146
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8IKM5 Pfam ID:PF01777
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L28
Gene (Uniprot):PF3D7_1142500
Chain IDs:R (auth: 2)
Chain Length:127
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8IHU0 Pfam ID:PF01778
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L35, putative
Gene (Uniprot):PF3D7_1124900
Chain IDs:U (auth: 3)
Chain Length:124
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8IIB4 Pfam ID:PF00831
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L29
Gene (Uniprot):PF3D7_1460300
Chain IDs:X (auth: 4)
Chain Length:67
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:C6S3J6 Pfam ID:PF01779
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L7, putative
Gene (Uniprot):PF3D7_0307200
Chain IDs:AA (auth: 5)
Chain Length:257
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:O97250 Pfam ID:PF08079, PF00327
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L30e, putative
Gene (Uniprot):PF3D7_1019400
Chain IDs:DA (auth: 6)
Chain Length:108
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8IJK8 Pfam ID:PF01248
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L31
Gene (Uniprot):PF3D7_0503800
Chain IDs:GA (auth: 7)
Chain Length:120
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8I463 Pfam ID:PF01198
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L32
Gene (Uniprot):PF3D7_0903900
Chain IDs:JA (auth: 8)
Chain Length:131
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8I3B0 Pfam ID:PF01655
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L35ae, putative
Gene (Uniprot):PF3D7_1142600
Chain IDs:MA (auth: 9)
Chain Length:140
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8IHT9 Pfam ID:PF01247
Polymer Type:polyribonucleotide
Molecule:28S ribosomal RNA
Chain IDs:A
Chain Length:3789
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit protein eS12
Gene (Uniprot):RPS12
Chain IDs:B (auth: AA)
Chain Length:141
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:O97249 Pfam ID:PF01248
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S18, putative
Gene (Uniprot):PF3D7_1126200
Chain IDs:F (auth: AB)
Chain Length:156
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8IIA2 Pfam ID:PF00416
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S29, putative
Gene (Uniprot):PF3D7_0705700
Chain IDs:I (auth: AC)
Chain Length:54
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:C0H4K8 Pfam ID:PF00253
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S15
Gene (Uniprot):PF3D7_1358800
Chain IDs:NA (auth: AD)
Chain Length:151
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8IDB0 Pfam ID:PF08069, PF00312
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S11, putative
Gene (Uniprot):PF3D7_0317600
Chain IDs:QA (auth: AE)
Chain Length:161
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:O77381 Pfam ID:PF16205, PF00366
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S17, putative
Gene (Uniprot):PF3D7_1242700
Chain IDs:XB (auth: AF)
Chain Length:137
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8I502 Pfam ID:PF00833
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S19
Gene (Uniprot):PF3D7_1317800
Chain IDs:AC (auth: AG)
Chain Length:145
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:C0H5C2 Pfam ID:PF00203
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S19
Gene (Uniprot):PF3D7_0422400
Chain IDs:D (auth: AH)
Chain Length:170
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8IFP2 Pfam ID:PF01090
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S21
Gene (Uniprot):PF3D7_1144000
Chain IDs:TA (auth: AI)
Chain Length:82
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8IHS5 Pfam ID:PF01249
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S24
Gene (Uniprot):PF3D7_0519400
Chain IDs:QB (auth: AJ)
Chain Length:133
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8I3R6 Pfam ID:PF01282
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S25
Gene (Uniprot):PF3D7_1421200
Chain IDs:ZA (auth: AK)
Chain Length:105
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8ILN8 Pfam ID:PF03297
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S26
Gene (Uniprot):PF3D7_0217800
Chain IDs:TB (auth: AL)
Chain Length:107
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:O96258 Pfam ID:PF01283
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S27
Gene (Uniprot):PF3D7_1308300
Chain IDs:WB (auth: AM)
Chain Length:82
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8IEN2 Pfam ID:PF01667
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S28e, putative
Gene (Uniprot):PF3D7_1461300
Chain IDs:CB (auth: AN)
Chain Length:67
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8IKL9 Pfam ID:PF01200
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit protein eS30
Gene (Uniprot):RPS30
Chain IDs:ZB (auth: AO)
Chain Length:58
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:O96269 Pfam ID:PF04758
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ribosomal protein S27a, putative
Gene (Uniprot):PF3D7_1402500
Chain IDs:FB (auth: AP)
Chain Length:149
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8IM64 Pfam ID:PF00240, PF01599
Polymer Type:polyribonucleotide
Molecule:tRNA
Chain IDs:WA (auth: AQ)
Chain Length:74
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polyribonucleotide
Molecule:5S ribosomal RNA
Chain IDs:E (auth: B)
Chain Length:119
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polyribonucleotide
Molecule:5.8S ribosomal RNA
Chain IDs:H (auth: C)
Chain Length:159
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L2
Gene (Uniprot):PF3D7_0516900
Chain IDs:K (auth: D)
Chain Length:260
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8I3T9 Pfam ID:PF00181, PF03947
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L3
Gene (Uniprot):PF3D7_1027800
Chain IDs:N (auth: E)
Chain Length:51
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8IJC6 Pfam ID:PF00297
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L4
Gene (Uniprot):PF3D7_0507100
Chain IDs:Q (auth: F)
Chain Length:411
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8I431 Pfam ID:PF00573, PF14374
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L11a, putative
Gene (Uniprot):PF3D7_0719600
Chain IDs:T (auth: G)
Chain Length:173
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8IBQ6 Pfam ID:PF00281, PF00673
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L6, putative
Gene (Uniprot):PF3D7_1323100
Chain IDs:W (auth: H)
Chain Length:190
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8IE85 Pfam ID:PF00347
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L6, putative
Gene (Uniprot):PF3D7_1338200
Chain IDs:Z (auth: I)
Chain Length:104
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:A0A5K1K8V8 Pfam ID:PF01159
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L7a
Gene (Uniprot):PF3D7_1424400
Chain IDs:CA (auth: J)
Chain Length:2092
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8ILL2 Pfam ID:PF01248
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L13, putative
Gene (Uniprot):PF3D7_1004000
Chain IDs:FA (auth: K)
Chain Length:202
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8IJZ7 Pfam ID:PF00572
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L13
Gene (Uniprot):PF3D7_0814000
Chain IDs:IA (auth: L)
Chain Length:263
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8IAX6 Pfam ID:PF01294
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L23, putative
Gene (Uniprot):PF3D7_1331800
Chain IDs:LA (auth: M)
Chain Length:139
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8IE09 Pfam ID:PF00238
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L14, putative
Gene (Uniprot):PF3D7_1431700
Chain IDs:OA (auth: N)
Chain Length:165
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8ILE8 Pfam ID:PF01929
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L27a, putative
Gene (Uniprot):PF3D7_0618300
Chain IDs:RA (auth: O)
Chain Length:261
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:C6KT23 Pfam ID:PF00828
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ribosomal protein L15
Gene (Uniprot):PF3D7_0415900
Chain IDs:UA (auth: P)
Chain Length:205
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:C0H4A6 Pfam ID:PF00827
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L10, putative
Gene (Uniprot):PF3D7_1414300
Chain IDs:XA (auth: Q)
Chain Length:219
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8ILV2 Pfam ID:PF00252
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L5, putative
Gene (Uniprot):PF3D7_1424100
Chain IDs:AB (auth: R)
Chain Length:195
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8ILL3 Pfam ID:PF17144, PF14204
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L18-2, putative
Gene (Uniprot):PF3D7_1341300
Chain IDs:DB (auth: S)
Chain Length:194
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:C0H5G3 Pfam ID:PF17135
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L19
Gene (Uniprot):PF3D7_0614500
Chain IDs:GB (auth: T)
Chain Length:130
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:C6KSY6 Pfam ID:PF01280
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L18a
Gene (Uniprot):PF3D7_1341200
Chain IDs:JB (auth: U)
Chain Length:218
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8IDS6 Pfam ID:PF01775
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L21
Gene (Uniprot):PF3D7_1426000
Chain IDs:MB (auth: V)
Chain Length:161
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8ILK3 Pfam ID:PF01157
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L17, putative
Gene (Uniprot):PF3D7_1351400
Chain IDs:PB (auth: W)
Chain Length:118
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8IDI5 Pfam ID:PF00237
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit protein eL22
Gene (Uniprot):PF3D7_0821700
Chain IDs:SB (auth: X)
Chain Length:137
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8IB51 Pfam ID:PF01776
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L23
Gene (Uniprot):PF3D7_1323400
Chain IDs:VB (auth: Y)
Chain Length:151
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8IE82 Pfam ID:PF03939, PF00276
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L26, putative
Gene (Uniprot):PF3D7_0312800
Chain IDs:YB (auth: Z)
Chain Length:126
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:O77364 Pfam ID:PF16906, PF00467
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L34
Gene (Uniprot):PF3D7_0710600
Chain IDs:PA (auth: a)
Chain Length:3789
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8IBY4 Pfam ID:PF01199
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L36
Gene (Uniprot):PF3D7_1109900
Chain IDs:SA (auth: b)
Chain Length:119
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8I713 Pfam ID:PF01158
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ribosomal protein L37
Gene (Uniprot):PF3D7_0706400
Chain IDs:VA (auth: c)
Chain Length:159
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:C0H4L5 Pfam ID:PF01907
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L38
Gene (Uniprot):PF3D7_1130100
Chain IDs:YA (auth: d)
Chain Length:260
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8II62 Pfam ID:PF01781
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L39
Gene (Uniprot):PF3D7_0611700
Chain IDs:BB (auth: e)
Chain Length:51
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:C0H4H3 Pfam ID:PF00832
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ubiquitin-60S ribosomal protein L40
Gene (Uniprot):PF3D7_1365900
Chain IDs:EB (auth: f)
Chain Length:411
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8ID50 Pfam ID:PF00240, PF01020
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L41
Gene (Uniprot):PF3D7_1144300
Chain IDs:HB (auth: g)
Chain Length:173
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:C6S3G4 Pfam ID:PF05162
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit protein eL43
Gene (Uniprot):RPL37A
Chain IDs:KB (auth: h)
Chain Length:190
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:O96184 Pfam ID:PF01780
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit protein eL42
Gene (Uniprot):RPL44
Chain IDs:NB (auth: i)
Chain Length:104
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:O97231 Pfam ID:PF00935
Polymer Type:polyribonucleotide
Molecule:18S ribosomal RNA
Chain IDs:C (auth: j)
Chain Length:2092
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit protein eS1
Gene (Uniprot):RPS3A
Chain IDs:G (auth: k)
Chain Length:202
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:O97313 Pfam ID:PF01015
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit protein uS2
Gene (Uniprot):RPS2
Chain IDs:J (auth: l)
Chain Length:263
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8IJD4 Pfam ID:PF00318
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S3
Gene (Uniprot):PF3D7_1465900
Chain IDs:IB (auth: m)
Chain Length:139
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8IKH8 Pfam ID:PF00189, PF07650
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S9, putative
Gene (Uniprot):PF3D7_0520000
Chain IDs:M (auth: n)
Chain Length:165
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8I3R0 Pfam ID:PF00163, PF01479
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S4
Gene (Uniprot):PF3D7_1105400
Chain IDs:P (auth: o)
Chain Length:261
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8IIU8 Pfam ID:PF08071, PF00900, PF00467, PF16121
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S5
Gene (Uniprot):PF3D7_1447000
Chain IDs:S (auth: p)
Chain Length:205
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8IL02 Pfam ID:PF00333, PF03719
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S6
Gene (Uniprot):PF3D7_1342000
Chain IDs:V (auth: q)
Chain Length:219
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8IDR9 Pfam ID:PF01092
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S5, putative
Gene (Uniprot):PF3D7_0721600
Chain IDs:LB (auth: r)
Chain Length:195
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8IBN5 Pfam ID:PF00177
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S7
Gene (Uniprot):PF3D7_1302800
Chain IDs:Y (auth: s)
Chain Length:194
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8IET7 Pfam ID:PF01251
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S15A, putative
Gene (Uniprot):PF3D7_0316800
Chain IDs:BA (auth: t)
Chain Length:130
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:O77395 Pfam ID:PF00410
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S8
Gene (Uniprot):PF3D7_1408600
Chain IDs:EA (auth: u)
Chain Length:218
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8IM10 Pfam ID:PF01201
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S16, putative
Gene (Uniprot):PF3D7_0813900
Chain IDs:OB (auth: v)
Chain Length:161
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8IAX5 Pfam ID:PF00380
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S20e, putative
Gene (Uniprot):PF3D7_1003500
Chain IDs:RB (auth: w)
Chain Length:118
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8IK02 Pfam ID:PF00338
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S10, putative
Gene (Uniprot):PF3D7_0719700
Chain IDs:UB (auth: x)
Chain Length:137
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:Q8IBQ5 Pfam ID:PF03501
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S11
Gene (Uniprot):PF3D7_0516200
Chain IDs:HA (auth: y)
Chain Length:151
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:A0A5K1K925 Pfam ID:PF00411
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S23, putative
Gene (Uniprot):PF3D7_0306900
Chain IDs:KA (auth: z)
Chain Length:126
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
UniProt ID:O97248 Pfam ID:PF00164
Ligand Molecules
MG
ZN
Primary Citation
Antimalarial drug artemisinin stabilizes PfRACK1 binding to the ribosome.
Structure 33 1386 ? (2025)
PMID: 40480224 DOI: 10.1016/j.str.2025.05.008

Abstact

Artemisinin and its derivatives represent the core agents in artemisinin combination therapies that are the current frontline treatment for P. falciparum and P. vivax malaria infections. Artemisinins are known to bind a wide array of proteins that disrupt the parasite's cellular physiology. Here, we show that artemisinins' cytotoxic activity involves structural alteration of key P. falciparum macromolecular complexes, including the ribosome, proteasome, and T-complex. The structural analysis revealed that, following artemisinin treatment, a larger population of Pf80S ribosomes binds PfRACK1. Unlike in most eukaryotes, PfRACK1 does not interact with the C-terminal tail of the r-protein uS3 that in Plasmodium is truncated. This likely suggests an evolved role of uS3 in facilitating RACK1-mediated translational regulation, which would potentially benefit the parasite under certain conditions. Stabilization of RACK1 ribosome interaction likely contributes to artemisinins' mode of action.

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Primary Citation of related structures
9J9I