9J9H image
Deposition Date 2024-08-22
Release Date 2025-06-04
Last Version Date 2025-06-04
Entry Detail
PDB ID:
9J9H
Keywords:
Title:
High-resolution cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to RACK1 and E-tRNA
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.45 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L24, putative
Gene (Uniprot):PF3D7_1309100
Chain IDs:B (auth: 0)
Chain Length:162
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L27
Gene (Uniprot):PF3D7_1460700
Chain IDs:F (auth: 1)
Chain Length:146
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L28
Gene (Uniprot):PF3D7_1142500
Chain IDs:J (auth: 2)
Chain Length:127
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L35, putative
Gene (Uniprot):PF3D7_1124900
Chain IDs:M (auth: 3)
Chain Length:124
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L29
Gene (Uniprot):PF3D7_1460300
Chain IDs:P (auth: 4)
Chain Length:67
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L7, putative
Gene (Uniprot):PF3D7_0307200
Chain IDs:S (auth: 5)
Chain Length:257
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L30e, putative
Gene (Uniprot):PF3D7_1019400
Chain IDs:V (auth: 6)
Chain Length:108
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L31
Gene (Uniprot):PF3D7_0503800
Chain IDs:Y (auth: 7)
Chain Length:120
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L32
Gene (Uniprot):PF3D7_0903900
Chain IDs:BA (auth: 8)
Chain Length:131
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L35ae, putative
Gene (Uniprot):PF3D7_1142600
Chain IDs:EA (auth: 9)
Chain Length:140
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polyribonucleotide
Molecule:28S ribosomal RNA
Chain IDs:A
Chain Length:3788
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit protein eS12
Gene (Uniprot):RPS12
Chain IDs:IA (auth: AA)
Chain Length:141
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S18, putative
Gene (Uniprot):PF3D7_1126200
Chain IDs:LA (auth: AB)
Chain Length:156
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S29, putative
Gene (Uniprot):PF3D7_0705700
Chain IDs:OA (auth: AC)
Chain Length:54
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S15
Gene (Uniprot):PF3D7_1358800
Chain IDs:RA (auth: AD)
Chain Length:151
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S11, putative
Gene (Uniprot):PF3D7_0317600
Chain IDs:UA (auth: AE)
Chain Length:161
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S17, putative
Gene (Uniprot):PF3D7_1242700
Chain IDs:XA (auth: AF)
Chain Length:137
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S19
Gene (Uniprot):PF3D7_1317800
Chain IDs:AB (auth: AG)
Chain Length:145
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S19
Gene (Uniprot):PF3D7_0422400
Chain IDs:DB (auth: AH)
Chain Length:170
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S21
Gene (Uniprot):PF3D7_1144000
Chain IDs:GB (auth: AI)
Chain Length:82
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S24
Gene (Uniprot):PF3D7_0519400
Chain IDs:JB (auth: AJ)
Chain Length:133
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S25
Gene (Uniprot):PF3D7_1421200
Chain IDs:MB (auth: AK)
Chain Length:105
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S26
Gene (Uniprot):PF3D7_0217800
Chain IDs:PB (auth: AL)
Chain Length:107
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S27
Gene (Uniprot):PF3D7_1308300
Chain IDs:SB (auth: AM)
Chain Length:82
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S28e, putative
Gene (Uniprot):PF3D7_1461300
Chain IDs:VB (auth: AN)
Chain Length:67
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit protein eS30
Gene (Uniprot):RPS30
Chain IDs:YB (auth: AO)
Chain Length:58
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:Ribosomal protein S27a, putative
Gene (Uniprot):PF3D7_1402500
Chain IDs:BC (auth: AP)
Chain Length:149
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polyribonucleotide
Molecule:tRNA
Chain IDs:D (auth: AQ)
Chain Length:74
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:Receptor for activated c kinase
Gene (Uniprot):PF3D7_0826700
Chain IDs:H (auth: AR)
Chain Length:323
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polyribonucleotide
Molecule:5S ribosomal RNA
Chain IDs:E (auth: B)
Chain Length:112
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polyribonucleotide
Molecule:5.8S ribosomal RNA
Chain IDs:I (auth: C)
Chain Length:92
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L2
Gene (Uniprot):PF3D7_0516900
Chain IDs:L (auth: D)
Chain Length:260
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L3
Gene (Uniprot):PF3D7_1027800
Chain IDs:O (auth: E)
Chain Length:386
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L4
Gene (Uniprot):PF3D7_0507100
Chain IDs:R (auth: F)
Chain Length:411
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L11a, putative
Gene (Uniprot):PF3D7_0719600
Chain IDs:U (auth: G)
Chain Length:173
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L6, putative
Gene (Uniprot):PF3D7_1323100
Chain IDs:X (auth: H)
Chain Length:190
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L6, putative
Gene (Uniprot):PF3D7_1338200
Chain IDs:AA (auth: I)
Chain Length:221
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L7a
Gene (Uniprot):PF3D7_1424400
Chain IDs:DA (auth: J)
Chain Length:283
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L13, putative
Gene (Uniprot):PF3D7_1004000
Chain IDs:GA (auth: K)
Chain Length:262
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L13
Gene (Uniprot):PF3D7_0814000
Chain IDs:JA (auth: L)
Chain Length:215
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L23, putative
Gene (Uniprot):PF3D7_1331800
Chain IDs:MA (auth: M)
Chain Length:139
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L14, putative
Gene (Uniprot):PF3D7_1431700
Chain IDs:PA (auth: N)
Chain Length:189
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L27a, putative
Gene (Uniprot):PF3D7_0618300
Chain IDs:SA (auth: O)
Chain Length:148
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:Ribosomal protein L15
Gene (Uniprot):PF3D7_0415900
Chain IDs:VA (auth: P)
Chain Length:205
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L10, putative
Gene (Uniprot):PF3D7_1414300
Chain IDs:YA (auth: Q)
Chain Length:219
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L5, putative
Gene (Uniprot):PF3D7_1424100
Chain IDs:BB (auth: R)
Chain Length:294
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L18-2, putative
Gene (Uniprot):PF3D7_1341300
Chain IDs:EB (auth: S)
Chain Length:187
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L19
Gene (Uniprot):PF3D7_0614500
Chain IDs:HB (auth: T)
Chain Length:130
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L18a
Gene (Uniprot):PF3D7_1341200
Chain IDs:KB (auth: U)
Chain Length:218
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L21
Gene (Uniprot):PF3D7_1426000
Chain IDs:NB (auth: V)
Chain Length:144
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L17, putative
Gene (Uniprot):PF3D7_1351400
Chain IDs:QB (auth: W)
Chain Length:203
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit protein eL22
Gene (Uniprot):PF3D7_0821700
Chain IDs:TB (auth: X)
Chain Length:139
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L23
Gene (Uniprot):PF3D7_1323400
Chain IDs:WB (auth: Y)
Chain Length:190
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L26, putative
Gene (Uniprot):PF3D7_0312800
Chain IDs:ZB (auth: Z)
Chain Length:145
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L34
Gene (Uniprot):PF3D7_0710600
Chain IDs:HA (auth: a)
Chain Length:3788
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L36
Gene (Uniprot):PF3D7_1109900
Chain IDs:KA (auth: b)
Chain Length:112
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:Ribosomal protein L37
Gene (Uniprot):PF3D7_0706400
Chain IDs:NA (auth: c)
Chain Length:92
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L38
Gene (Uniprot):PF3D7_1130100
Chain IDs:QA (auth: d)
Chain Length:260
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L39
Gene (Uniprot):PF3D7_0611700
Chain IDs:TA (auth: e)
Chain Length:386
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:Ubiquitin-60S ribosomal protein L40
Gene (Uniprot):PF3D7_1365900
Chain IDs:WA (auth: f)
Chain Length:411
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:60S ribosomal protein L41
Gene (Uniprot):PF3D7_1144300
Chain IDs:ZA (auth: g)
Chain Length:173
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit protein eL43
Gene (Uniprot):RPL37A
Chain IDs:CB (auth: h)
Chain Length:190
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:Large ribosomal subunit protein eL42
Gene (Uniprot):RPL44
Chain IDs:FB (auth: i)
Chain Length:221
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polyribonucleotide
Molecule:18S ribosomal RNA
Chain IDs:IB (auth: j)
Chain Length:283
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit protein eS1
Gene (Uniprot):RPS3A
Chain IDs:LB (auth: k)
Chain Length:262
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:Small ribosomal subunit protein uS2
Gene (Uniprot):RPS2
Chain IDs:OB (auth: l)
Chain Length:215
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S3
Gene (Uniprot):PF3D7_1465900
Chain IDs:RB (auth: m)
Chain Length:139
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S9, putative
Gene (Uniprot):PF3D7_0520000
Chain IDs:UB (auth: n)
Chain Length:189
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S4
Gene (Uniprot):PF3D7_1105400
Chain IDs:XB (auth: o)
Chain Length:148
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S5
Gene (Uniprot):PF3D7_1447000
Chain IDs:AC (auth: p)
Chain Length:205
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S6
Gene (Uniprot):PF3D7_1342000
Chain IDs:C (auth: q)
Chain Length:219
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S5, putative
Gene (Uniprot):PF3D7_0721600
Chain IDs:G (auth: r)
Chain Length:294
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S7
Gene (Uniprot):PF3D7_1302800
Chain IDs:K (auth: s)
Chain Length:187
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S15A, putative
Gene (Uniprot):PF3D7_0316800
Chain IDs:N (auth: t)
Chain Length:130
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S8
Gene (Uniprot):PF3D7_1408600
Chain IDs:Q (auth: u)
Chain Length:218
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S16, putative
Gene (Uniprot):PF3D7_0813900
Chain IDs:T (auth: v)
Chain Length:144
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S20e, putative
Gene (Uniprot):PF3D7_1003500
Chain IDs:W (auth: w)
Chain Length:203
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S10, putative
Gene (Uniprot):PF3D7_0719700
Chain IDs:Z (auth: x)
Chain Length:139
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S11
Gene (Uniprot):PF3D7_0516200
Chain IDs:CA (auth: y)
Chain Length:190
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:40S ribosomal protein S23, putative
Gene (Uniprot):PF3D7_0306900
Chain IDs:FA (auth: z)
Chain Length:145
Number of Molecules:1
Biological Source:Plasmodium falciparum 3D7
Primary Citation
Antimalarial drug artemisinin stabilizes PfRACK1 binding to the ribosome
Structure ? ? ? (2025)
DOI: 10.1016/j.str.2025.05.008
Primary Citation of related structures