9J5X image
Deposition Date 2024-08-13
Release Date 2025-02-26
Last Version Date 2025-06-04
Entry Detail
PDB ID:
9J5X
Title:
Cryo-EM Structure of URAT1 in Complex with Lingolinurad
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.44 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Solute carrier family 22 member 12
Gene (Uniprot):Slc22a12
Chain IDs:A
Chain Length:553
Number of Molecules:1
Biological Source:Rattus norvegicus
Primary Citation
Structural Basis for Inhibition of Urate Reabsorption in URAT1.
Jacs Au 5 1308 1319 (2025)
PMID: 40151250 DOI: 10.1021/jacsau.4c01188

Abstact

The urate transporter 1 (URAT1) is the primary urate transporter in the kidney responsible for urate reabsorption and, therefore, is crucial for urate homeostasis. Hyperuricemia causes the common human disease gout and other pathological consequences. Inhibition of urate reabsorption through URAT1 has been shown as a promising strategy in alleviating hyperuricemia, and clinical and preclinical drug candidates targeting URAT1 are emerging. However, how small molecules inhibit URAT1 remains undefined, and the lack of accurate URAT1 complex structures hinders the development of better therapeutics. Here, we present cryoelectron microscopy structures of a humanized rat URAT1 bound with benzbromarone, lingdolinurad, and verinurad, elucidating the structural basis for drug recognition and inhibition. The three small molecules reside in the URAT1 central cavity with different binding modes, locking URAT1 in an inward-facing conformation. This study provides mechanistic insights into the drug modulation of URAT1 and sheds light on the rational design of potential URAT1-specific therapeutics for treating hyperuricemia.

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Primary Citation of related structures