9J1L image
Deposition Date 2024-08-05
Release Date 2025-01-08
Last Version Date 2025-03-05
Entry Detail
PDB ID:
9J1L
Title:
Side fiber of monocin
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.28 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Alpha-amylase
Gene (Uniprot):A3R20_11335, AF817_12260, AP104_04205, ARR48_10360, B4X68_12585, DG57_02060, DOV25_05000, F1788_11040, FB15_01515, FC284_08555, GCV64_11985, GI230_09860, GT011_12435, GYO01_10525, GYP27_04165, GYU24_12610, GZK27_10240
Chain IDs:A (auth: 1), H (auth: N), M (auth: n)
Chain Length:191
Number of Molecules:3
Biological Source:Listeria monocytogenes
Polymer Type:polypeptide(L)
Molecule:FtbP
Gene (Uniprot):A3R20_11345, AF817_12270, AP104_04215, ARR48_10370, B4X68_12595, DG57_02070, DOV25_05010, E1X78_08095, F1788_11050, FB15_01517, FPL45_04495, GHO09_06960, GI230_09870, GT011_12445, GYO01_10535, GYP27_04175, GYU24_12620, GZK27_10250
Chain IDs:B (auth: 2), D (auth: A), E (auth: B), F (auth: C), G (auth: I), J (auth: P), K (auth: Q), L (auth: R), O (auth: p)
Chain Length:178
Number of Molecules:9
Biological Source:Listeria monocytogenes
Polymer Type:polypeptide(L)
Molecule:FtbO
Gene (Uniprot):A3R20_11340, AP104_04210, ARR48_10365, B4X68_12590, DOV25_05005, E1X78_08090, F1788_11045, FB15_01516, FC284_08550, FPL45_04490, GCV64_11990, GHO09_06955, GI230_09865, GYO01_10530, GYP27_04170, GZK27_10245
Chain IDs:C (auth: 3), N (auth: o)
Chain Length:159
Number of Molecules:2
Biological Source:Listeria monocytogenes
Polymer Type:polypeptide(L)
Molecule:FtbO
Gene (Uniprot):A3R20_11340, AP104_04210, ARR48_10365, B4X68_12590, DOV25_05005, E1X78_08090, F1788_11045, FB15_01516, FC284_08550, FPL45_04490, GCV64_11990, GHO09_06955, GI230_09865, GYO01_10530, GYP27_04170, GZK27_10245
Chain IDs:I (auth: O)
Chain Length:146
Number of Molecules:1
Biological Source:Listeria monocytogenes
Ligand Molecules
Primary Citation
Structure of an F-type phage tail-like bacteriocin from Listeria monocytogenes.
Nat Commun 16 1695 1695 (2025)
PMID: 39956822 DOI: 10.1038/s41467-025-57075-3

Abstact

F-type phage tail-like bacteriocins (PTLBs) are high-molecular-weight protein complexes exhibiting bactericidal activity and share evolutionary similarities with the tails of non-contractile siphoviruses. In this study, we present the atomic structure of monocin, a genetically engineered F-type PTLB from Listeria monocytogenes. Our detailed atomic-level analysis, excluding two chaperone proteins, provides crucial insights into the molecular architecture of F-type PTLBs. The core structure of monocin resembles TP901-1-like phage tails, featuring three side fibers with receptor-binding domains that connect to the baseplate for host adhesion. Based on these findings, we propose a potential mechanism by which F-type PTLBs induce cell death, offering a foundation for developing targeted antibacterial therapies.

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Primary Citation of related structures