9J1K image
Deposition Date 2024-08-05
Release Date 2025-01-08
Last Version Date 2025-07-16
Entry Detail
PDB ID:
9J1K
Title:
Tip region of monocin
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.88 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:AA protein
Gene (Uniprot):lmaA
Chain IDs:A (auth: D), B (auth: E), C (auth: F), D (auth: G), E (auth: H), J (auth: a), K (auth: b), L (auth: c), M (auth: d), N (auth: g), P (auth: A), Q (auth: B), R (auth: C), S (auth: I), T (auth: N), Y (auth: S), Z (auth: T), AA (auth: U), BA (auth: V), CA (auth: W), EA (auth: Y), FA (auth: Z), GA (auth: e), HA (auth: f), IA (auth: h), NA (auth: n), OA (auth: o), PA (auth: p), QA (auth: q), RA (auth: r)
Chain Length:170
Number of Molecules:30
Biological Source:Listeria monocytogenes
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:FtbJ
Gene (Uniprot):ftbJ
Chain IDs:F (auth: J), U (auth: O), JA (auth: i)
Chain Length:622
Number of Molecules:3
Biological Source:Listeria monocytogenes
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:FtbK
Gene (Uniprot):ftbK
Chain IDs:G (auth: K), O (auth: k), V (auth: P), DA (auth: X), KA (auth: j), SA (auth: s)
Chain Length:622
Number of Molecules:6
Biological Source:Listeria monocytogenes
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:FtbL
Gene (Uniprot):ftbL
Chain IDs:H (auth: L), W (auth: Q), LA (auth: l)
Chain Length:378
Number of Molecules:3
Biological Source:Listeria monocytogenes
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:CCA-adding enzyme
Gene (Uniprot):A3R20_11330, A8L61_07710, AB917_02085, ABZ57_09960, AJL21_02030, AP104_04200, APD94_11425, ARR48_10355, ART25_13195, ARY78_13770, B1N52_06375, B1S26_07950, B4X68_12580, B5K54_07795, BB997_05860, BCZ19_12990, BCZ21_05460, C9762_10615, CA369_04990, CAV64_13870, CW845_05275, D4920_13655, D4B11_08605, D5N24_13015, D7104_05165, DCK61_14240, DCT16_05910, DQ70_12630, DU018_08390, E1W56_14365, E1X78_08080, E5F58_14140, EC36_00403, EX365_09155, EXZ73_03495, F1788_11035, F6436_02035, F6515_08455, FA835_09685, FB15_01514, FC284_08560, FLQ97_01015, FLR03_08795, FNX40_02335, FV747_02095, G3O21_000410, GCV64_11980, GHH22_14100, GHO09_06945, GI230_09855, GI949_02080, GJW51_04825, GQG13_06330, GYP27_04160, GYR60_10865, GYS09_07365, GYX23_01995, GYY14_04870, GZK27_10235, HQN34_001864, HZJ64_05095, KV70_02030, QD52_06175, UI29_06190, Y261_12780
Chain IDs:I (auth: M), X (auth: R), MA (auth: m)
Chain Length:99
Number of Molecules:3
Biological Source:Listeria monocytogenes
Ligand Molecules
Primary Citation
Structure of an F-type phage tail-like bacteriocin from Listeria monocytogenes.
Nat Commun 16 1695 1695 (2025)
PMID: 39956822 DOI: 10.1038/s41467-025-57075-3

Abstact

F-type phage tail-like bacteriocins (PTLBs) are high-molecular-weight protein complexes exhibiting bactericidal activity and share evolutionary similarities with the tails of non-contractile siphoviruses. In this study, we present the atomic structure of monocin, a genetically engineered F-type PTLB from Listeria monocytogenes. Our detailed atomic-level analysis, excluding two chaperone proteins, provides crucial insights into the molecular architecture of F-type PTLBs. The core structure of monocin resembles TP901-1-like phage tails, featuring three side fibers with receptor-binding domains that connect to the baseplate for host adhesion. Based on these findings, we propose a potential mechanism by which F-type PTLBs induce cell death, offering a foundation for developing targeted antibacterial therapies.

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Primary Citation of related structures