9J1K image
Entry Detail
PDB ID:
9J1K
EMDB ID:
Title:
Tip region of monocin
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2024-08-05
Release Date:
2025-01-08
Method Details:
Experimental Method:
Resolution:
2.88 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:AA protein
Chain IDs:A (auth: D), B (auth: E), C (auth: F), D (auth: G), E (auth: H), J (auth: a), K (auth: b), L (auth: c), M (auth: d), N (auth: g), P (auth: A), Q (auth: B), R (auth: C), S (auth: I), T (auth: N), Y (auth: S), Z (auth: T), AA (auth: U), BA (auth: V), CA (auth: W), EA (auth: Y), FA (auth: Z), GA (auth: e), HA (auth: f), IA (auth: h), NA (auth: n), OA (auth: o), PA (auth: p), QA (auth: q), RA (auth: r)
Chain Length:170
Number of Molecules:30
Biological Source:Listeria monocytogenes
Polymer Type:polypeptide(L)
Description:FtbJ
Chain IDs:F (auth: J), U (auth: O), JA (auth: i)
Chain Length:622
Number of Molecules:3
Biological Source:Listeria monocytogenes
Polymer Type:polypeptide(L)
Description:FtbK
Chain IDs:G (auth: K), O (auth: k), V (auth: P), DA (auth: X), KA (auth: j), SA (auth: s)
Chain Length:622
Number of Molecules:6
Biological Source:Listeria monocytogenes
Polymer Type:polypeptide(L)
Description:FtbL
Chain IDs:H (auth: L), W (auth: Q), LA (auth: l)
Chain Length:378
Number of Molecules:3
Biological Source:Listeria monocytogenes
Polymer Type:polypeptide(L)
Description:CCA-adding enzyme
Chain IDs:I (auth: M), X (auth: R), MA (auth: m)
Chain Length:99
Number of Molecules:3
Biological Source:Listeria monocytogenes
Ligand Molecules
Primary Citation
Structure of an F-type phage tail-like bacteriocin from Listeria monocytogenes.
Nat Commun 16 1695 1695 (2025)
PMID: 39956822 DOI: 10.1038/s41467-025-57075-3

Abstact

F-type phage tail-like bacteriocins (PTLBs) are high-molecular-weight protein complexes exhibiting bactericidal activity and share evolutionary similarities with the tails of non-contractile siphoviruses. In this study, we present the atomic structure of monocin, a genetically engineered F-type PTLB from Listeria monocytogenes. Our detailed atomic-level analysis, excluding two chaperone proteins, provides crucial insights into the molecular architecture of F-type PTLBs. The core structure of monocin resembles TP901-1-like phage tails, featuring three side fibers with receptor-binding domains that connect to the baseplate for host adhesion. Based on these findings, we propose a potential mechanism by which F-type PTLBs induce cell death, offering a foundation for developing targeted antibacterial therapies.

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Primary Citation of related structures