9J1J image
Deposition Date 2024-08-05
Release Date 2025-01-08
Last Version Date 2025-07-16
Entry Detail
PDB ID:
9J1J
Title:
Cap region of monocin
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.42 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:DUF5072 domain-containing protein
Gene (Uniprot):AP104_04165, B4X68_12545
Chain IDs:C (auth: F), D (auth: A), G (auth: D), J (auth: I), M (auth: L), P (auth: O)
Chain Length:129
Number of Molecules:6
Biological Source:Listeria monocytogenes
Polymer Type:polypeptide(L)
Molecule:AA protein
Gene (Uniprot):lmaA
Chain IDs:A (auth: G), B (auth: g), E (auth: B), F (auth: C), H (auth: E), I (auth: H), K (auth: J), L (auth: K), N (auth: M), O (auth: N), Q (auth: P), R (auth: Q)
Chain Length:170
Number of Molecules:12
Biological Source:Listeria monocytogenes
Ligand Molecules
Primary Citation
Structure of an F-type phage tail-like bacteriocin from Listeria monocytogenes.
Nat Commun 16 1695 1695 (2025)
PMID: 39956822 DOI: 10.1038/s41467-025-57075-3

Abstact

F-type phage tail-like bacteriocins (PTLBs) are high-molecular-weight protein complexes exhibiting bactericidal activity and share evolutionary similarities with the tails of non-contractile siphoviruses. In this study, we present the atomic structure of monocin, a genetically engineered F-type PTLB from Listeria monocytogenes. Our detailed atomic-level analysis, excluding two chaperone proteins, provides crucial insights into the molecular architecture of F-type PTLBs. The core structure of monocin resembles TP901-1-like phage tails, featuring three side fibers with receptor-binding domains that connect to the baseplate for host adhesion. Based on these findings, we propose a potential mechanism by which F-type PTLBs induce cell death, offering a foundation for developing targeted antibacterial therapies.

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Primary Citation of related structures