9J1I image
Deposition Date 2024-08-05
Release Date 2025-03-19
Last Version Date 2025-03-19
Entry Detail
PDB ID:
9J1I
Keywords:
Title:
Apo structure of the F2Y224-FtmOx1 mutant with metal Iron
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.11 Å
R-Value Free:
0.21
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Verruculogen synthase
Gene (Uniprot):ftmOx1
Chain IDs:A, B
Chain Length:312
Number of Molecules:2
Biological Source:Aspergillus fumigatus Af293
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
F2Y A TYR modified residue
Primary Citation
Characterizing Y224 conformational flexibility in FtmOx1-catalysis using 19 F NMR spectroscopy.
Catalysis Science And Technology 15 386 395 (2025)
PMID: 39669701 DOI: 10.1039/d4cy01077a

Abstact

α-Ketoglutarate-dependent non-haem iron (αKG-NHFe) enzymes play a crucial role in natural product biosynthesis, and in some cases exhibiting multifunctional catalysis capability. This study focuses on αKG-NHFe enzyme FtmOx1, which catalyzes endoperoxidation, dealkylation, and alcohol oxidation reactions in verruculogen biosynthesis. We explore the hypothesis that the conformational dynamics of the active site Y224 confer the multifunctional activities of FtmOx1-catalysis. Utilizing Y224-to-3,5-difluorotyrosine-substituted FtmOx1, produced via the amber codon suppression method, we conducted 19F NMR characterization to investigate FtmOx1's structural flexibility. Subsequent biochemical and X-ray crystallographic analyses provided insights into how specific conformations of FtmOx1-substrate complexes influence their catalytic activities. These findings underscore the utility of 19F NMR as a powerful tool for elucidating the complex mechanisms of multifunctional enzymes, offering potential avenues for developing biocatalytic processes to produce novel therapeutic agents harnessing their unique catalytic properties.

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