9IVD image
Entry Detail
PDB ID:
9IVD
EMDB ID:
EMD-60925
Keywords:
SIGNALING PROTEIN
Title:
Cryo-EM structure of CyclinD1 bound AMBRA1-DDB1
Biological Source:
Source Organism:
Homo sapiens
Host Organism:
Homo sapiens
PDB Version:
Deposition Date:
2024-07-23
Release Date:
2025-04-23
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.55 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
9IVD validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Description:DNA damage-binding protein 1
Chain IDs:C (auth: A)
Chain Length:1140
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:Q16531 Pfam ID:PF10433, PF03178
Protein Blast
Polymer Type:polypeptide(L)
Description:Activating molecule in BECN1-regulated autophagy protein 1
Chain IDs:B
Chain Length:396
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:Q9C0C7 Pfam ID:PF00400
Protein Blast
Polymer Type:polypeptide(L)
Description:G1/S-specific cyclin-D1
Chain IDs:A (auth: E)
Chain Length:295
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P24385 Pfam ID:PF00134, PF02984
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
TPO A THR modified residue
Ligand Molecules
NA
Primary Citation
Mechanism of D-type cyclins recognition by the AMBRA1 E3 ligase receptor
To Be Published ? ? ? (?)
Primary Citation of related structures
9IVD