9IVB image
Entry Detail
PDB ID:
9IVB
Keywords:
Title:
Crystal structure of c-Met kinase domain bound by bozitinib
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2024-07-23
Release Date:
2025-01-22
Method Details:
Experimental Method:
Resolution:
2.35 Å
R-Value Free:
0.27
R-Value Work:
0.24
R-Value Observed:
0.28
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Hepatocyte growth factor receptor
Chain IDs:A, B
Chain Length:309
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Characterization of Bozitinib as a potential therapeutic agent for MET-amplified gastric cancer.
Commun Biol 8 134 134 (2025)
PMID: 39875456 DOI: 10.1038/s42003-025-07490-5

Abstact

Hyperactive c-Met signaling pathway caused by altered MET is a common mechanism underlying gastric cancer and represents an attractive target for the treatment of gastric cancer with MET alterations. However, no c-Met kinase inhibitors are currently approved specifically for the treatment of c-Met-amplified gastric cancer. Recently, bozitinib, a highly selective c-Met kinase inhibitor, has shown remarkable potency in selectively inhibiting MET-altered non-small cell lung cancer and secondary glioblastoma. In this study, we investigate the antitumor activity of bozitinib against MET-amplified gastric cancer and elucidate its molecular mechanism. Bozitinib demonstrates a strong effect on MET-amplified gastric cancer cells by blocking the c-Met signaling pathway, leading to the inhibition of cell proliferation and survival, as well as the induction of G0/G1 phase arrest and apoptosis. Structurally, bozitinib is optimally embedded in the ATP pocket of c-Met and firmly binds via an extensive interaction network. In addition, bozitinib efficiently inhibits c-Met resistance-conferring mutations G1163R and Y1230H, although its potency is significantly decreased against the D1228N and Y1230C mutations. Overall, our study reveals the molecular mechanism of bozitinib against c-Met, highlights its ability to overcome acquired resistance mutations, and provides valuable insights into further design and improvement of selective c-Met inhibitors.

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Primary Citation of related structures