ISDA: 9IU6

Deposition Date 2024-07-20

Release Date 2026-03-04

Last Version Date 2026-03-04

Entry Detail

PDB ID:

9IU6

Keywords:

DNA BINDING PROTEIN

Title:

Cryo-EM structure of the large serine recombinase Bxb1 in complex with attP and attB (CA/CA CDN) in the intermediate-strand exchange state 1

Biological Source:

Source Organism(s):

Mycobacterium phage Bxb1 (Taxon ID: 2902907)
Mycolicibacterium smegmatis (Taxon ID: 1772)

Expression System(s):

Escherichia coli

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.97 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Polymer Type:polypeptide(L)
Molecule:Integrase
Chain IDs:A, B, C, D
Chain Length:500
Number of Molecules:4
Biological Source:Mycobacterium phage Bxb1

Polymer Type:polydeoxyribonucleotide
Molecule:attP-L
Chain IDs:E (auth: E1)
Chain Length:27
Number of Molecules:1
Biological Source:Mycobacterium phage Bxb1

Polymer Type:polydeoxyribonucleotide
Molecule:attP-R
Chain IDs:F (auth: E2)
Chain Length:25
Number of Molecules:1
Biological Source:Mycobacterium phage Bxb1

Polymer Type:polydeoxyribonucleotide
Molecule:attP-L
Chain IDs:G (auth: F1)
Chain Length:25
Number of Molecules:1
Biological Source:Mycobacterium phage Bxb1

Polymer Type:polydeoxyribonucleotide
Molecule:attP-R
Chain IDs:H (auth: F2)
Chain Length:27
Number of Molecules:1
Biological Source:Mycobacterium phage Bxb1

Polymer Type:polydeoxyribonucleotide
Molecule:attB-L
Chain IDs:I (auth: G1)
Chain Length:24
Number of Molecules:1
Biological Source:Mycolicibacterium smegmatis

Polymer Type:polydeoxyribonucleotide
Molecule:attB-R
Chain IDs:J (auth: G2)
Chain Length:22
Number of Molecules:1
Biological Source:Mycolicibacterium smegmatis

Polymer Type:polydeoxyribonucleotide
Molecule:attB-L
Chain IDs:K (auth: H1)
Chain Length:22
Number of Molecules:1
Biological Source:Mycolicibacterium smegmatis

Polymer Type:polydeoxyribonucleotide
Molecule:attB-R
Chain IDs:L (auth: H2)
Chain Length:24
Number of Molecules:1
Biological Source:Mycolicibacterium smegmatis

Ligand Molecules

Primary Citation

Cryo-EM structure of the large serine recombinase Bxb1 in complex with attP and attB (CA/CA CDN) in the intermediate-strand exchange state 1

Soma, T.Show

To Be Published ? ? ? (?)

Primary Citation of related structures

Feedback Form