9IQ8 image
Deposition Date 2024-07-12
Release Date 2025-07-16
Last Version Date 2025-07-16
Entry Detail
PDB ID:
9IQ8
Title:
Ankyrin-like protein, AnkB
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.42 Å
R-Value Free:
0.28
R-Value Work:
0.24
R-Value Observed:
0.24
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Ankyrin-like protein AnkB
Gene (Uniprot):CBE85_13960, J6E47_00490
Chain IDs:A, B, C, D
Chain Length:161
Number of Molecules:4
Biological Source:Acinetobacter baumannii
Primary Citation
Structural analysis of a bacterial ankyrin-like protein secreted by Acinetobacter baumannii.
Biochem.Biophys.Res.Commun. 733 150573 150573 (2024)
PMID: 39208644 DOI: 10.1016/j.bbrc.2024.150573

Abstact

In bacteria, the ankyrin-like protein AnkB helps overcome stress by regulating catalase activity when expressed under stressful conditions. As the structural properties of AnkB are largely unexplored, our understanding of various AnkB-mediated functions in bacteria remains limited. In the present study, we describe the structure of AnkB from Acinetobacter baumannii, hereafter referred to as "AbAnkB," which has a unique tertiary configuration compared with that of other ankyrin domain-containing proteins. Structural analysis revealed that AbAnkB has a relatively long loop between AKR3 and AKR4 and an oppositely positioned α8 helix. Based on amino acid conservation and protein surface analyses, we identified a hydrophobic patch that might be critical for the function of AbAnkB. To the best of our knowledge, our study is the first to report the structure of a bacterial AnkB protein; our findings will markedly enhance our understanding of its functions in bacteria.

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