9IOX image
Deposition Date 2024-07-09
Release Date 2025-05-21
Last Version Date 2025-07-30
Entry Detail
PDB ID:
9IOX
Keywords:
Title:
Cryo-EM structure of a TEF30-associated intermediate PSII core dimer complex, type II, from Chlamydomonas reinhardtii
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.30 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II protein D1
Gene (Uniprot):psbA
Chain IDs:A, Q (auth: a)
Chain Length:327
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II CP47 reaction center protein
Gene (Uniprot):psbB
Chain IDs:B, R (auth: b)
Chain Length:480
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II CP43 reaction center protein
Gene (Uniprot):psbC
Chain IDs:C, S (auth: c)
Chain Length:450
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II D2 protein
Gene (Uniprot):psbD
Chain IDs:D, T (auth: d)
Chain Length:351
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cytochrome b559 subunit alpha
Gene (Uniprot):psbE
Chain IDs:E, U (auth: e)
Chain Length:74
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cytochrome b559 subunit beta
Gene (Uniprot):psbF
Chain IDs:F, V (auth: f)
Chain Length:31
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:PDZ domain-containing protein
Gene (Uniprot):CHLRE_01g031100v5
Chain IDs:G, W (auth: g)
Chain Length:195
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II reaction center protein H
Gene (Uniprot):psbH
Chain IDs:H, X (auth: h)
Chain Length:71
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II reaction center protein I
Gene (Uniprot):psbI
Chain IDs:I, Y (auth: i)
Chain Length:34
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II reaction center protein K
Gene (Uniprot):psbK
Chain IDs:J (auth: K), Z (auth: k)
Chain Length:37
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II reaction center protein L
Gene (Uniprot):psbL
Chain IDs:K (auth: L), AA (auth: l)
Chain Length:38
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II reaction center protein M
Gene (Uniprot):psbM
Chain IDs:L (auth: M), BA (auth: m)
Chain Length:27
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II reaction center protein T
Gene (Uniprot):psbT
Chain IDs:M (auth: T), CA (auth: t)
Chain Length:28
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II reaction center protein Psb30
Gene (Uniprot):psb30
Chain IDs:N (auth: V), DA (auth: v)
Chain Length:31
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Chloroplast photosystem II subunit X
Gene (Uniprot):CHLRE_02g082750v5, CHLRE_02g082852v5
Chain IDs:O (auth: X), EA (auth: x)
Chain Length:32
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II reaction center protein Z
Gene (Uniprot):psbZ
Chain IDs:P (auth: Z), FA (auth: z)
Chain Length:61
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Primary Citation
Roles of multiple TEF30-associated intermediate complexes in the repair and reassembly of photosystem II in Chlamydomonas reinhardtii.
Nat.Plants 11 1455 1469 (2025)
PMID: 40579438 DOI: 10.1038/s41477-025-02036-3

Abstact

During oxygenic photosynthesis, photosystem II (PSII) uses light energy for oxidizing water and reducing plastoquinone. It is susceptible to photodamage, and the damaged PSII is repaired through a sophisticated biological process assisted by numerous auxiliary proteins. Here we report the cryogenic electron microscopy structures of four PSII-repair complexes from Chlamydomonas reinhardtii associated with the Thylakoid Enriched Fraction 30 (TEF30, an orthologue of plant MET1) protein-namely, a TEF30-PSII core monomer (TEF30-C), two types of TEF30-PSII core dimers (types I and II, TEF302-C2-I and TEF302-C2-II) and a TEF30-C2S-type PSII-LHCII supercomplex (TEF30-C2S; S, strongly associated light-harvesting complex II trimer). TEF30 mediates the assembly of CP43 with the RC47 module by clamping on the stromal surfaces and prevents the premature association of peripheral antennae with PSII-C. In the transition from TEF302-C2-I to TEF302-C2-II, TEF30-C2S and mature C2S2, one PSII core slides along the dimerization interface against the adjacent one by 22-35 Å, generating a zigzagged surface for accommodating the peripheral antennae. These results suggest that the PSII repair process undergoes multiple TEF30-mediated intermediate states to form intact PSII-LHCII supercomplexes.

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