9IKY image
Deposition Date 2024-06-29
Release Date 2025-06-18
Last Version Date 2025-06-18
Entry Detail
PDB ID:
9IKY
Keywords:
Title:
Crystal structure of 1-2C-T96F TCR in complex with HLA-A*11:01 bound to KRAS-G12V peptide (VVGAVGVGK)
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.45 Å
R-Value Free:
0.23
R-Value Work:
0.20
R-Value Observed:
0.21
Space Group:
P 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:MHC class I antigen
Gene (Uniprot):HLA-A
Chain IDs:A (auth: o), F (auth: A), K (auth: F), P (auth: K), U (auth: P), Z (auth: U), EA (auth: Z), JA (auth: e), OA (auth: j), TA (auth: t)
Chain Length:100
Number of Molecules:10
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Beta-2-microglobulin
Gene (Uniprot):B2M
Chain IDs:B (auth: p), G (auth: B), L (auth: G), Q (auth: L), V (auth: Q), AA (auth: V), FA (auth: a), KA (auth: f), PA (auth: k), UA (auth: u)
Chain Length:100
Number of Molecules:10
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:VAL-VAL-GLY-ALA-VAL-GLY-VAL-GLY-LYS
Chain IDs:C (auth: q), H (auth: C), M (auth: H), R (auth: M), W (auth: R), BA (auth: W), GA (auth: b), LA (auth: g), QA (auth: l), VA (auth: v)
Chain Length:100
Number of Molecules:10
Biological Source:Kirsten murine sarcoma virus
Polymer Type:polypeptide(L)
Molecule:1-2C-T96F TCR alpha chain
Chain IDs:D (auth: r), I (auth: D), N (auth: I), S (auth: N), X (auth: S), CA (auth: X), HA (auth: c), MA (auth: h), RA (auth: m), WA (auth: w)
Chain Length:9
Number of Molecules:10
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Molecule:1-2C-T96F TCR beta chain
Chain IDs:E (auth: s), J (auth: E), O (auth: J), T (auth: O), Y (auth: T), DA (auth: Y), IA (auth: d), NA (auth: i), SA (auth: n), XA (auth: x)
Chain Length:242
Number of Molecules:10
Biological Source:Mus musculus
Ligand Molecules
Primary Citation
An Engineered Soluble Single-Chain TCR Engager for KRAS-G12V Specific Tumor Immunotherapy.
Adv Sci ? e00181 e00181 (2025)
PMID: 40470869 DOI: 10.1002/advs.202500181

Abstact

T cell receptor (TCR) based immunotherapy is an attractive strategy to target a wide range of intra-tumoral antigens and elicit robust tumor cytotoxicity. However, engineering soluble TCR engagers that preserve physiological affinity is crucial for universal TCR drug development, yet remains challenging. In the present study, multiple TCR engagers featuring diverse architectures based on the KRAS-G12V specific 1-2C TCR in the context of HLA-A*11:01 is designed and evaluated. Notably, a soluble tandem double single-chain TCR (STanD-scTCR) engager, comprising two repeated single-chain variable fragment (scFv) TCRs, exhibit enhanced binding avidity and potent T-cell activation. Through site-directed mutagenesis, T96F mutation (T96F-TCR) within the TCR β chain is identified, which substantially augment T cell reactivity while maintaining physiological affinity and minimizing off-target cross-reactivity. The T96F-mutated STanD-scTCR engager demonstrates improved antigen sensitivity, promotes multi-functional T-cell responses, and facilitates immune synapse formation between T cells and target cells. In a xenograft tumor model harboring the KRAS-G12V mutation, the TCR engager displays substantial tumor suppression efficacy. These findings underscore the therapeutic potential of 1-2C STanD-scTCR engage in targeting KRAS-G12V mutations in the context of HLA-A*11:01. Furthermore, the engineering strategies employ in the development of STanD-scTCR engager provide an invaluable for future designs of TCR engager drugs.

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Primary Citation of related structures