9IIG image
Deposition Date 2024-06-20
Release Date 2025-04-30
Last Version Date 2025-06-11
Entry Detail
PDB ID:
9IIG
Keywords:
Title:
Cryo-EM structure of hetero-bacterioferritin SoBfr12 from Shewanella oneidensis
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.60 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Bacterioferritin
Gene (Uniprot):brf1
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L
Chain Length:155
Number of Molecules:12
Biological Source:Shewanella oneidensis MR-1
Polymer Type:polypeptide(L)
Molecule:Bacterioferritin
Gene (Uniprot):brf2
Chain IDs:M, N, O, P, Q, R, S, T, U, V, W, X
Chain Length:157
Number of Molecules:12
Biological Source:Shewanella oneidensis MR-1
Primary Citation
Unveiling Structural Heterogeneity and Evolutionary Adaptations of Heteromultimeric Bacterioferritin Nanocages.
Adv Sci 12 ? ? (2025)
PMID: 40167232 DOI: 10.1002/advs.202409957

Abstact

Iron-storage bacterioferritins (Bfrs), existing in either homo- or hetero-multimeric form, play a crucial role in iron homeostasis. While the structure and function of homo-multimeric bacterioferritins (homo-Bfrs) have been extensively studied, little is known about the assembly, distinctive characteristics, or evolutionary adaptations of hetero-multimeric bacterioferritins (hetero-Bfrs). Here, the cryo-EM structure and functional characterization of a bacterial hetero-Bfr (SoBfr12) are reported. Compared to homo-Bfrs, although SoBfr12 exhibits a conserved spherical cage-like dodecahedron, its pores through which ions traverse exhibit substantially increased diversity. Importantly, the heterogeneity has significant impacts on sites for ion entry, iron oxidation, and reduction. Moreover, evolutionary analyses reveal that hetero-Bfrs may represent a new class within the Bfr subfamily, consisting of two different types that may have evolved from homo-Bfr through tandem duplication and directly from ferritin (Ftn) via dispersed duplication, respectively. These results reveal remarkable structural and functional features of a hetero-Bfr, enabling the rational design of nanocages for enhanced iron-storing efficiency and for other specific purposes, such as drug delivery vehicles and nanozymes.

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