9HUW image
Deposition Date 2024-12-23
Release Date 2025-10-22
Last Version Date 2025-10-22
Entry Detail
PDB ID:
9HUW
Keywords:
Title:
Trypanosoma brucei PTR1 (TbPTR1) in complex with inhibitor F232
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.80 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Pteridine reductase
Gene (Uniprot):PTR1
Chain IDs:A, B, C, D
Chain Length:289
Number of Molecules:4
Biological Source:Trypanosoma brucei brucei
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
CSX A CYS modified residue
Primary Citation
Design of 2-Aminobenzothiazole Derivatives Targeting Trypanosomatid PTR1 by a Multidisciplinary Fragment Hybridization Approach.
J.Med.Chem. 68 20595 20618 (2025)
PMID: 41026998 DOI: 10.1021/acs.jmedchem.5c01799

Abstact

Pteridine reductase 1 (PTR1) is a folate pathway enzyme essential for pathogenic trypanosomatids and a promising drug target for diseases such as sleeping sickness and leishmaniasis. Previous studies have shown that the 2-aminobenzothiazole moiety targets the PTR1 biopterin pocket, while 3,4-dichlorophenyl-containing compounds, such as I bind a different region of the Trypanosoma brucei PTR1 (TbPTR1) pocket. This study combines both moieties via various linkers, creating two compound series screened in silico against TbPTR1 and Leishmania major PTR1 (LmPTR1). In the first series, five compounds were synthesized, and 1a and 1b emerged as potent TbPTR1 inhibitors, with 1b also being active against LmPTR1 and moderately effective against Leishmania infantum. Furthermore, structure-activity relationship analysis, supported by quantum calculations and crystallography, revealed meta-halogenation to be more favorable than para, although single halogenation reduced antiparasite effects. Our fragment hybridization approach led to less toxic, more effective compounds than I.

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Primary Citation of related structures