9HRC image
Deposition Date 2024-12-17
Release Date 2025-03-12
Last Version Date 2025-03-26
Entry Detail
PDB ID:
9HRC
Keywords:
Title:
Structure of MNK2 in complex with inhibitor NUCC-0201049
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.16 Å
R-Value Free:
0.24
R-Value Work:
0.18
Space Group:
P 32 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:MAP kinase-interacting serine/threonine-protein kinase 2
Gene (Uniprot):MKNK2
Mutations:D228G
Chain IDs:A
Chain Length:316
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Discovery of Potent and Selective MNK Kinase Inhibitors for the Treatment of Leukemia.
J.Med.Chem. 68 5824 5844 (2025)
PMID: 40033556 DOI: 10.1021/acs.jmedchem.4c03158

Abstact

MNK activity is regulated by the p38 and Erk MAPK pathways. Phosphorylation of MNK leads to its activation and binding to the eIF4G/eIF4E complex. MNK then phosphorylates eIF4E at Ser209, whose activation is associated with oncogene translation, leading to tumorigenesis. Given this important role for eIF4E in tumorigenesis, MNK inhibition with novel small molecule inhibitors could be a promising strategy to combat AML, which continues to be an area of unmet medical need. Here, we report the medicinal optimization of a series of novel inhibitors and their evaluation of their effects on eIF4E and leukemia cell viability. We discovered a class of ether-containing compounds with a high MNK1/2 selectivity. These MNK inhibitors show good potency in reducing cell viability and colony formation and have desirable pharmacokinetic properties. X-ray cocrystallization was accomplished to confirm the binding mode of our inhibitors and aid in future optimization.

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