ISDA: 9HMP

Deposition Date 2024-12-09

Release Date 2025-12-24

Last Version Date 2025-12-24

Entry Detail

PDB ID:

9HMP

Keywords:

RNA BINDING PROTEIN

Title:

X-ray structure of S. cerevisiae threonylcarbamoyladenosine dehydratase 1 (residues 50-429) in complex with AMP

Biological Source:

Source Organism:

Saccharomyces cerevisiae (Taxon ID: 4932)

Host Organism:

Escherichia coli BL21(DE3)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

4.00 Å

R-Value Free:

0.29

R-Value Work:

0.25

R-Value Observed:

0.25

Space Group:

P 65 2 2

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:tRNA threonylcarbamoyladenosine dehydratase 1
Gene (Uniprot):TCD1
Chain IDs:A, B, C, D
Chain Length:382
Number of Molecules:4
Biological Source:Saccharomyces cerevisiae

UniProt ID:P38756 Pfam ID:PF00899

Ligand Molecules

AMP

GOL

Primary Citation

Structural and biochemical characterization of yeast Tcd enzymes installing the epigenetic modification ct6A in tRNA

Hirschmann, J, Sonntag, R, Heiss, M, Wegrzyn, E, Heinemeyer, W, Carell, T, Huber, E.M.Show

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