ISDA: 9HKQ

Deposition Date 2024-12-04

Release Date 2025-12-17

Last Version Date 2025-12-17

Entry Detail

PDB ID:

9HKQ

Keywords:

PROTEIN BINDING

Title:

Structure of VHH5 targeting NY-ESO-1(SLLMWITQC)/HLA-A*02:01

Biological Source:

Source Organism(s):

Mus musculus (Taxon ID: 10090)
Homo sapiens (Taxon ID: 9606)
synthetic construct (Taxon ID: 32630)

Expression System(s):

Homo sapiens, Escherichia coli bl21(de3)

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.30 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Cancer/testis antigen 1
Gene (Uniprot):CTAG1A, CTAG1B
Chain IDs:E (auth: A)
Chain Length:9
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P78358

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:MHC class I antigen
Gene (Uniprot):HLA-A
Chain IDs:D (auth: B)
Chain Length:274
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q8WLS4 Pfam ID:PF00129, PF07654

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Beta-2-microglobulin
Gene (Uniprot):B2M
Chain IDs:C
Chain Length:99
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P61769 Pfam ID:PF07654

Polymer Type:polypeptide(L)
Molecule:BM17 antibody heavy chain
Chain IDs:A (auth: D)
Chain Length:224
Number of Molecules:1
Biological Source:Mus musculus

Polymer Type:polypeptide(L)
Molecule:BM17 antibody light chain
Chain IDs:B (auth: E)
Chain Length:209
Number of Molecules:1
Biological Source:Mus musculus

Polymer Type:polypeptide(L)
Molecule:single domain antibody VHH5
Chain IDs:F
Chain Length:113
Number of Molecules:1
Biological Source:synthetic construct

Ligand Molecules

Primary Citation

Targeting Intracellular Antigen with TCR-Mimic Single-Domain Antibody for Cancer Immunotherapy

Jie, B, Shanghai, C, Xinyu, G, Yanping, S, Linling, Z, Lingxiao, J, Shuqing, C, Xinlei, Z, Xing, Z, Liqiang, P.Show

To Be Published ? ? ? (?)

Primary Citation of related structures

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