9HAN image
Deposition Date 2024-11-04
Release Date 2025-08-20
Last Version Date 2025-08-27
Entry Detail
PDB ID:
9HAN
Title:
Bovine collagen VI local refinement of C-terminal region
Biological Source:
Source Organism:
Bos taurus (Taxon ID: 9913)
Method Details:
Experimental Method:
Resolution:
4.33 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Collagen type VI alpha 1 chain
Gene (Uniprot):COL6A1
Chain IDs:B (auth: A), E (auth: D)
Chain Length:1027
Number of Molecules:2
Biological Source:Bos taurus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Collagen type VI alpha 2 chain
Gene (Uniprot):COL6A2
Chain IDs:C (auth: B), F (auth: E)
Chain Length:1027
Number of Molecules:2
Biological Source:Bos taurus
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Collagen type VI alpha 3 chain
Gene (Uniprot):COL6A3
Chain IDs:A (auth: C), D (auth: F)
Chain Length:3061
Number of Molecules:2
Biological Source:Bos taurus
Ligand Molecules
Primary Citation
Collagen VI microfibril structure reveals mechanism for molecular assembly and clustering of inherited pathogenic mutations.
Nat Commun 16 7549 7549 (2025)
PMID: 40813585 DOI: 10.1038/s41467-025-62923-3

Abstact

Collagen VI links the cell surface to the extracellular matrix to provide mechanical strength to most mammalian tissues, and is linked to human diseases including muscular dystrophy, fibrosis, cardiovascular disease and osteoarthritis. Collagen VI assembles from heterotrimers of three different α-chains into microfibrils, but there are many gaps in our knowledge of the molecular assembly process. Here, we determine the structures of both heterotrimeric mini-collagen VI constructs and collagen VI microfibrils, from mammalian tissue, using cryogenic-electron microscopy. These structures reveal a cysteine-rich coiled coil region involved in trimerisation as well as microfibril assembly. Furthermore, our structures show that pathogenic mutations are located at interaction sites involved in different steps of collagen VI assembly, from the trimeric-coiled coil region that mediates heterotrimerisation, to clusters of mutations in the triple-helical region involved in microfibril formation. Our microfibril structure provides a template for understanding supramolecular assembly, and offers a platform for rationale design of therapeutics for collagen VI pathologies.

Legend

Protein

Chemical

Disease

Primary Citation of related structures
Feedback Form
Name
Email
Institute
Feedback