ISDA: 9H5K

Deposition Date 2024-10-22

Release Date 2025-11-05

Last Version Date 2025-11-05

Entry Detail

PDB ID:

9H5K

Keywords:

SIGNALING PROTEIN

Title:

Cryo-EM structure of the SEAC-EGOC supercomplex

Biological Source:

Source Organism:

Saccharomyces cerevisiae (Taxon ID: 4932)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.20 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Restriction of telomere capping protein 1
Gene (Uniprot):RTC1
Chain IDs:C (auth: A), K (auth: I)
Chain Length:310
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae

UniProt ID:Q08281 Pfam ID:PF00400, PF17120

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Maintenance of telomere capping protein 5
Gene (Uniprot):MTC5
Chain IDs:A (auth: C), I (auth: K)
Chain Length:341
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae

UniProt ID:Q03897 Pfam ID:PF00400, PF05773, PF17120

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Nucleoporin SEH1
Gene (Uniprot):SEH1
Chain IDs:D (auth: F), E, H (auth: D), L (auth: N), M, P (auth: L)
Chain Length:349
Number of Molecules:6
Biological Source:Saccharomyces cerevisiae

UniProt ID:P53011 Pfam ID:PF00400

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:SEH-associated protein 4
Gene (Uniprot):SEA4
Chain IDs:F (auth: G), G (auth: B), N (auth: O), O (auth: J)
Chain Length:310
Number of Molecules:4
Biological Source:Saccharomyces cerevisiae

UniProt ID:P38164 Pfam ID:PF21719, PF17034

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Protein transport protein SEC13
Gene (Uniprot):SEC13
Chain IDs:B (auth: H), J (auth: P)
Chain Length:297
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae

UniProt ID:Q04491 Pfam ID:PF00400

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Protein MEH1
Gene (Uniprot):MEH1
Chain IDs:V (auth: R), DA (auth: S)
Chain Length:184
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae

UniProt ID:Q02205 Pfam ID:PF15454

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Nitrogen permease regulator 2
Gene (Uniprot):NPR2
Chain IDs:S (auth: T), AA (auth: g)
Chain Length:615
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae

UniProt ID:P39923 Pfam ID:PF06218

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Protein EGO2
Gene (Uniprot):EGO2
Chain IDs:W (auth: U), EA (auth: W)
Chain Length:75
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae

UniProt ID:Q3E830 Pfam ID:PF11503

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Vacuolar membrane-associated protein IML1
Gene (Uniprot):IML1
Chain IDs:U (auth: X), CA (auth: j)
Chain Length:1584
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae

UniProt ID:P47170 Pfam ID:PF12257, PF00610, PF19418

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Protein SLM4
Gene (Uniprot):SLM4
Chain IDs:X (auth: Y), FA (auth: Z)
Chain Length:162
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae

UniProt ID:P38247 Pfam ID:PF16818

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:GTP-binding protein GTR1
Gene (Uniprot):GTR1
Chain IDs:Q (auth: a), Y (auth: b)
Chain Length:310
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae

UniProt ID:Q00582 Pfam ID:PF04670

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:GTP-binding protein GTR2
Gene (Uniprot):GTR2
Chain IDs:R (auth: c), Z (auth: d)
Chain Length:341
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae

UniProt ID:P53290 Pfam ID:PF04670

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Nitrogen permease regulator 3
Gene (Uniprot):NPR3
Chain IDs:T (auth: h), BA (auth: i)
Chain Length:297
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae

UniProt ID:P38742 Pfam ID:PF03666

Ligand Molecules