9GNW image
Deposition Date 2024-09-04
Release Date 2025-09-17
Last Version Date 2025-09-17
Entry Detail
PDB ID:
9GNW
Keywords:
PHOTOSYNTHESIS
Title:
Universal PSII assembly intermediate
Biological Source:
Source Organism:
Dunaliella salina (Taxon ID: 3046)
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
2.93 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
9GNW validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II protein D1
Gene (Uniprot):psbA
Chain IDs:A
Chain Length:336
Number of Molecules:1
Biological Source:Dunaliella salina
UniProt ID:D0FY08 Pfam ID:PF00124
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II CP47 reaction center protein
Gene (Uniprot):psbB
Chain IDs:B
Chain Length:484
Number of Molecules:1
Biological Source:Dunaliella salina
UniProt ID:A0A1C8XRM6 Pfam ID:PF00421
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II CP43 reaction center protein
Gene (Uniprot):psbC
Chain IDs:D (auth: C)
Chain Length:449
Number of Molecules:1
Biological Source:Dunaliella salina
UniProt ID:D0FXY3 Pfam ID:PF00421
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II D2 protein
Gene (Uniprot):psbD
Chain IDs:E (auth: D)
Chain Length:348
Number of Molecules:1
Biological Source:Dunaliella salina
UniProt ID:A0A1C8XRK9 Pfam ID:PF00124
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cytochrome b559 subunit alpha
Gene (Uniprot):psbE
Chain IDs:F (auth: E)
Chain Length:76
Number of Molecules:1
Biological Source:Dunaliella salina
UniProt ID:D0FY01 Pfam ID:PF00283, PF00284
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cytochrome b559 subunit beta
Gene (Uniprot):psbF
Chain IDs:G (auth: F)
Chain Length:31
Number of Molecules:1
Biological Source:Dunaliella salina
UniProt ID:A0A1C8XRP4 Pfam ID:PF00283
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II reaction center protein H
Gene (Uniprot):psbH
Chain IDs:H
Chain Length:67
Number of Molecules:1
Biological Source:Dunaliella salina
UniProt ID:A0A1C8XRP3 Pfam ID:PF00737
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II reaction center protein I
Gene (Uniprot):psbI
Chain IDs:I
Chain Length:33
Number of Molecules:1
Biological Source:Dunaliella salina
UniProt ID:D0FXX5 Pfam ID:PF02532
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II reaction center protein J
Gene (Uniprot):psbJ
Chain IDs:J
Chain Length:36
Number of Molecules:1
Biological Source:Dunaliella salina
UniProt ID:A0A1C8XRM8 Pfam ID:PF01788
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II reaction center protein K
Gene (Uniprot):psbK
Chain IDs:K
Chain Length:37
Number of Molecules:1
Biological Source:Dunaliella salina
UniProt ID:D0FXX2 Pfam ID:PF02533
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II reaction center protein L
Gene (Uniprot):psbL
Chain IDs:L
Chain Length:36
Number of Molecules:1
Biological Source:Dunaliella salina
UniProt ID:D0FY19 Pfam ID:PF02419
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II reaction center protein M
Gene (Uniprot):psbM
Chain IDs:M
Chain Length:31
Number of Molecules:1
Biological Source:Dunaliella salina
UniProt ID:D0FXZ3 Pfam ID:PF05151
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:PsbO
Gene (Uniprot):DTER00134_LOCUS7801
Chain IDs:N (auth: O)
Chain Length:238
Number of Molecules:1
Biological Source:Dunaliella salina
UniProt ID:A0A7S3QTM3 Pfam ID:PF01716
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:PsbP
Chain IDs:O (auth: P)
Chain Length:187
Number of Molecules:1
Biological Source:Dunaliella salina
UniProt ID:A0A9J4RF14 Pfam ID:PF01789
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II reaction center protein T
Gene (Uniprot):psbT
Chain IDs:P (auth: T)
Chain Length:30
Number of Molecules:1
Biological Source:Dunaliella salina
UniProt ID:D0FY04 Pfam ID:PF01405
Polymer Type:polypeptide(L)
Molecule:Photosystem II reaction center protein U, PsbU
Chain IDs:T (auth: U)
Chain Length:28
Number of Molecules:1
Biological Source:Dunaliella salina
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II reaction center protein Psb30
Gene (Uniprot):ycf12
Chain IDs:C (auth: V)
Chain Length:33
Number of Molecules:1
Biological Source:Dunaliella salina
UniProt ID:D0FY13 Pfam ID:PF05969
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:PSII 6.1 kDa protein
Chain IDs:Q (auth: W)
Chain Length:45
Number of Molecules:1
Biological Source:Dunaliella salina
UniProt ID:A0A9J4RF15 Pfam ID:PF07123
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II PsbX
Gene (Uniprot):DTER00134_LOCUS5623
Chain IDs:R (auth: X)
Chain Length:33
Number of Molecules:1
Biological Source:Dunaliella salina
UniProt ID:A0A7S3VKF3 Pfam ID:PF06596
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Photosystem II reaction center protein Z
Gene (Uniprot):psbZ
Chain IDs:S (auth: Z)
Chain Length:61
Number of Molecules:1
Biological Source:Dunaliella salina
UniProt ID:D0FXZ2 Pfam ID:PF01737
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
CSD B CYS modified residue
Ligand Molecules
3PH
BCR
BCT
C7Z
CL
CLA
DGA
DGD
FE2
HEM
LHG
LMG
LMU
NA
OEX
PHO
PL9
RRX
SQD
Primary Citation
Universal PSII assembly intermediate
To Be Published ? ? ? (?)
Primary Citation of related structures
9GNW