ISDA

Entry Detail

PDB ID:

9GKM

EMDB ID:

EMD-51429

Keywords:

LIGASE

Title:

Structure of HECT E3 TRIP12 forming K29/K48-branched Ubiquitin chains

Biological Source:

Source Organism:

Homo sapiens

Host Organism:

Escherichia coli

PDB Version:

Deposition Date:

2024-08-25

Release Date:

2025-05-21

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.69 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Description:Isoform 3 of E3 ubiquitin-protein ligase TRIP12
Chain IDs:D (auth: A)
Chain Length:1565
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q14669 Pfam ID:PF00632

Protein Blast

Polymer Type:polypeptide(L)
Description:Ubiquitin
Chain IDs:A (auth: B)
Chain Length:75
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P0CG48 Pfam ID:PF00240

Protein Blast

Polymer Type:polypeptide(L)
Description:Polyubiquitin-C
Mutations:K29C
Chain IDs:B (auth: C)
Chain Length:76
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P0CG48 Pfam ID:PF00240

Protein Blast

Polymer Type:polypeptide(L)
Description:Polyubiquitin-B
Mutations:K48R
Chain IDs:C (auth: D)
Chain Length:76
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P0CG47 Pfam ID:PF00240

Ligand Molecules

SY8

Primary Citation

TRIP12 structures reveal HECT E3 formation of K29 linkages and branched ubiquitin chains

Maiwald, S.A, Schneider, L.A, Vollrath, R, Liwocha, J, Maletic, M.D, Swatek, K.N, Mulder, M.P.C, Schulman, B.A.Show

To Be Published ? ? ? (2025)

Primary Citation of related structures