9GFG image
Deposition Date 2024-08-09
Release Date 2025-08-20
Last Version Date 2026-01-14
Entry Detail
PDB ID:
9GFG
Keywords:
Title:
BCR Fab from the subset 1 chronic lymphocytic leukaemia case P3129
Biological Source:
Source Organism(s):
Homo sapiens (Taxon ID: 9606)
Expression System(s):
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Free:
0.24
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:BCR P3129 heavy chain
Chain IDs:A (auth: H), C (auth: A), E (auth: C), G (auth: E)
Chain Length:225
Number of Molecules:4
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:BCR P3129 light chain
Chain IDs:B (auth: L), D (auth: B), F (auth: D), H (auth: F)
Chain Length:215
Number of Molecules:4
Biological Source:Homo sapiens
Primary Citation
Defective cell-autonomous signalling and antigenic polyreactivity of B-cell receptors from chronic lymphocytic leukaemia stereotyped subset 1.
Nat Commun ? ? ? (2025)
PMID: 41469389 DOI: 10.1038/s41467-025-68040-5

Abstact

A shared feature of B-cell receptors (BCRs) expressed on neoplastic B cells from patients with chronic lymphocytic leukaemia (CLL) concerns their continual activation of intracellular signalling without requiring external antigens. This autonomous signalling mechanism has previously been demonstrated to arise from BCR-BCR homotypic interactions in three distinct stereotyped CLL subsets (2, 4 and 169). CLL subset 1 is the second largest stereotyped subset, epitomizing unmutated CLL and known for a particularly aggressive clinical course. Here we show that, despite their significant sequence similarity, BCRs originating from three different subset 1 CLL cases exhibit variations in their combining site structures and associated physicochemical properties. Subset 1 BCRs are characterized by a common reactivity pattern towards various autoantigens, though they maintain distinct receptor-specific characteristics. Analysis of crystal structures of the respective BCR Fab fragments reveals lack of conservation in intermolecular crystal contacts, paralleled by no self-association in solution and incapacity to induce intracellular signalling when expressed in a model B-cell line. These findings suggest that cell-autonomous signalling may not be universally present across all CLL, implying the existence of other mechanisms in sustaining leukemic cell proliferation and CLL progression mediated by BCR signalling.

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Primary Citation of related structures
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