9GBC image
Deposition Date 2024-07-30
Release Date 2025-08-06
Last Version Date 2025-09-17
Entry Detail
PDB ID:
9GBC
Keywords:
Title:
Bacteroides thetaiotaomicron siderophore transporter XusA in complex with surface-exposed lipoprotein XusB
Biological Source:
Method Details:
Experimental Method:
Resolution:
2.70 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:TonB-linked outer membrane receptor
Gene (Uniprot):BT_2065
Chain IDs:A
Chain Length:796
Number of Molecules:1
Biological Source:Bacteroides thetaiotaomicron VPI-5482
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:DUF4374 domain-containing protein
Gene (Uniprot):BT_2064
Chain IDs:B
Chain Length:470
Number of Molecules:1
Biological Source:Bacteroides thetaiotaomicron VPI-5482
Primary Citation
Structural basis of iron piracy by human gut Bacteroides.
Biorxiv ? ? ? (2025)
PMID: 40894706 DOI: 10.1101/2024.04.15.589501

Abstact

Iron is an essential element that can be growth-limiting in microbial communities, particularly those present within host organisms. To acquire iron, many bacteria secrete siderophores, secondary metabolites that chelate ferric iron. These iron chelates can be transported back into the cell via TonB-dependent transporters in the outer membrane, followed by intracellular liberation of the iron. Pathogenic Escherichia coli and Salmonella produce siderophores during gut infection. In response to iron starvation, the human gut symbiont Bacteroides thetaiotaomicron upregulates an iron piracy system, XusABC, which steals iron-bound siderophores from the invading pathogens. Here, we investigated the molecular details of xenosiderophore uptake across the outer membrane by the XusAB complex. Our crystal and cryogenic electron microscopy structures explain how the XusB lipoprotein recognises iron-bound xenosiderophores and passes them on to the XusA TonB-dependent transporter. Moreover, we show that Xus homologues can transport a variety of siderophores with different iron-chelating functional groups.

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Primary Citation of related structures