9FZG image
Entry Detail
PDB ID:
9FZG
Keywords:
Title:
Crystal structure of the hPXR-LBD in complex with compound JMV7035
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2024-07-05
Release Date:
2025-02-19
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 43 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Nuclear receptor subfamily 1 group I member 2
Chain IDs:A
Chain Length:320
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
A two-in-one expression construct for biophysical and structural studies of the human pregnane X receptor ligand-binding domain, a pharmaceutical and environmental target.
Acta Crystallogr.,Sect.F 81 85 94 (2025)
PMID: 39923198 DOI: 10.1107/S2053230X2500069X

Abstact

The ligand-binding domain (LBD) of the human nuclear receptor pregnane X receptor (PXR) is known to crystallize in two different crystal forms, P212121 or P43212, depending on the construct and the strategy used for protein production, as well as the presence or absence of the coactivator-derived peptide SRC-1. In order to facilitate biophysical and structural studies, a versatile construct was designed that allows access to both forms. This was achieved by introducing a thrombin cleavage site between the PXRLBD and the SRC-1 peptide fused to its C-terminus. Here, we describe the expression, purification and crystallization processes of this novel construct and report two new structures of PXRLBD that were obtained thanks to this strategy.

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