9FRB image
Deposition Date 2024-06-18
Release Date 2025-07-02
Last Version Date 2025-08-13
Entry Detail
PDB ID:
9FRB
Keywords:
Title:
CryoEM structure of human rho1 GABAA receptor in complex with CGP36742
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.05 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Gamma-aminobutyric acid receptor subunit rho-1
Gene (Uniprot):GABRR1
Chain IDs:A, B, C, D, E
Chain Length:479
Number of Molecules:5
Biological Source:Homo sapiens
Primary Citation
Cryo-EM structures of rho 1 GABA A receptors with antagonist and agonist drugs.
Nat Commun 16 7077 7077 (2025)
PMID: 40750757 DOI: 10.1038/s41467-025-61932-6

Abstact

The family of ρ-type GABAA receptors includes potential therapeutic targets in several neurological conditions, and features distinctive pharmacology compared to other subtypes. Here we report four cryo-EM structures with previously unresolved ligands, electrophysiology recordings, and molecular dynamics simulations to characterize binding and conformational impact of the drugs THIP (a non-opioid analgesic), CGP36742 (a phosphinic acid) and GABOB (an anticonvulsant) on a human ρ1 GABAA receptor. A distinctive binding pose of THIP in ρ1 versus α4β3δ GABAA receptors offers a rationale for its inverse effects on these subtypes. CGP36742 binding is similar to the canonical ρ-type inhibitor TPMPA, supporting a shared mechanism of action among phosphinic acids. Binding of GABOB is similar to GABA, but produces a mixture of partially-locked and desensitized states, likely underlying weaker agonist activity. Together, these results elucidate interactions of a ρ-type GABAA receptor with therapeutic drugs, offering mechanistic insights and a basis for further pharmaceutical development.

Legend

Protein

Chemical

Disease

Primary Citation of related structures