9FP6 image
Deposition Date 2024-06-13
Release Date 2024-07-03
Last Version Date 2025-07-16
Entry Detail
PDB ID:
9FP6
Keywords:
Title:
Structure of the NbNRC2 hexameric resistosome
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.90 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:NRC2a
Mutations:L9E, L13E, L17E
Chain IDs:A, B, C, D, E, F
Chain Length:886
Number of Molecules:6
Biological Source:Nicotiana benthamiana
Ligand Molecules
Primary Citation
A disease resistance protein triggers oligomerization of its NLR helper into a hexameric resistosome to mediate innate immunity.
Sci Adv 10 eadr2594 eadr2594 (2024)
PMID: 39504373 DOI: 10.1126/sciadv.adr2594

Abstact

NRCs are essential helper NLR (nucleotide-binding domain and leucine-rich repeat) proteins that execute immune responses triggered by sensor NLRs. The resting state of NbNRC2 was recently shown to be a homodimer, but the sensor-activated state remains unclear. Using cryo-EM, we determined the structure of sensor-activated NbNRC2, which forms a hexameric inflammasome-like resistosome. Mutagenesis of the oligomerization interface abolished immune signaling, confirming the functional significance of the NbNRC2 resistosome. Comparative structural analyses between the resting state homodimer and sensor-activated homohexamer revealed substantial rearrangements, providing insights into NLR activation mechanisms. Furthermore, structural comparisons between NbNRC2 hexamer and previously reported CC-NLR pentameric assemblies revealed features allowing an additional protomer integration. Using the NbNRC2 hexamer structure, we assessed the recently released AlphaFold 3 for predicting activated CC-NLR oligomers, revealing high-confidence modeling of NbNRC2 and other CC-NLR amino-terminal α1 helices, a region proven difficult to resolve structurally. Overall, our work sheds light on NLR activation mechanisms and expands understanding of NLR structural diversity.

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Protein

Chemical

Disease

Primary Citation of related structures