9FP3 image
Deposition Date 2024-06-12
Release Date 2025-12-17
Last Version Date 2025-12-17
Entry Detail
PDB ID:
9FP3
Keywords:
TRANSCRIPTION
Title:
T. thermophilus RNA pol TC-Ap4A
Biological Source:
Source Organism:
Thermus thermophilus HB8 (Taxon ID: 300852)
synthetic construct (Taxon ID: 32630)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
2.42 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
9FP3 validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerase subunit alpha
Gene (Uniprot):rpoA
Chain IDs:A, B
Chain Length:315
Number of Molecules:2
Biological Source:Thermus thermophilus HB8
UniProt ID:Q5SHR6 Pfam ID:PF01193, PF01000, PF03118 EC:2.7.7.6
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerase subunit beta
Gene (Uniprot):rpoB
Chain IDs:C
Chain Length:1119
Number of Molecules:1
Biological Source:Thermus thermophilus HB8
UniProt ID:Q8RQE9 Pfam ID:PF04563, PF04561, PF04565, PF10385, PF00562, PF04560 EC:2.7.7.6
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerase subunit beta'
Gene (Uniprot):rpoC
Chain IDs:D
Chain Length:1524
Number of Molecules:1
Biological Source:Thermus thermophilus HB8
UniProt ID:Q8RQE8 Pfam ID:PF04997, PF21668, PF00623, PF04983, PF05000, PF04998 EC:2.7.7.6
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerase subunit omega
Gene (Uniprot):rpoZ
Chain IDs:E
Chain Length:99
Number of Molecules:1
Biological Source:Thermus thermophilus HB8
UniProt ID:Q8RQE7 Pfam ID:PF01192 EC:2.7.7.6
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:RNA polymerase sigma factor SigA
Gene (Uniprot):sigA
Chain IDs:F
Chain Length:449
Number of Molecules:1
Biological Source:Thermus thermophilus HB8
UniProt ID:Q72L95 Pfam ID:PF00140, PF04542, PF04539, PF04545
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (31-MER)
Chain IDs:G
Chain Length:53
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (35-MER)
Chain IDs:H
Chain Length:53
Number of Molecules:1
Biological Source:synthetic construct
Ligand Molecules
B4P
G2P
MG
ZN
Primary Citation
Molecular Insight into 5' RNA Capping with dinucleoside polyphosphates by bacterial RNA Polymerase
To Be Published ? ? ? (?)
Primary Citation of related structures
9FP3
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