9FO1 image
Deposition Date 2024-06-11
Release Date 2025-01-22
Last Version Date 2025-02-05
Entry Detail
PDB ID:
9FO1
Keywords:
Title:
Family S1_16 sulfatase from metagenomic dataset AMOR
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
3.11 Å
R-Value Free:
0.19
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
I 21 3
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:k-carrageenan sulfatase S1_16
Chain IDs:A
Chain Length:467
Number of Molecules:1
Biological Source:Bryobacteraceae
Primary Citation
Identification and Characterization of a New Thermophilic kappa-Carrageenan Sulfatase.
J.Agric.Food Chem. 73 2044 2055 (2025)
PMID: 39797788 DOI: 10.1021/acs.jafc.4c09751

Abstact

Carrageenans are sulfated polysaccharides found in the cell wall of certain red seaweeds. They are widely used in the food industry for their gelling and stabilizing properties. In nature, carrageenans undergo enzymatic modification and degradation by marine organisms. Characterizing these enzymes is crucial for understanding carrageenan utilization and may eventually enable the development of targeted processes to modify carrageenans for industrial applications. In our study, we characterized a κ-carrageenan sulfatase, AMOR_S1_16A, belonging to the sulfatase S1_16 subfamily, which selectively desulfates the nonreducing end galactoses of κ-carrageenan oligomers in an exomode. Notably, AMOR_S1_16A represents the first κ-carrageenan sulfatase within the S1_16 subfamily and exhibits a novel enzymatic activity. This study provides further understanding of the substrate specificity and characteristics of the S1_16 subfamily. Moreover, this research highlights that many processes and enzymes remain to be discovered to fully understand carrageenan utilization pathways and to develop enzymatic processes for carrageenan modification and processing.

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