ISDA: 9FMW

Deposition Date 2024-06-07

Release Date 2025-06-18

Last Version Date 2025-06-18

Entry Detail

PDB ID:

9FMW

Keywords:

VIRAL PROTEIN

Title:

Omicron BA.1 Spike protein with neutralizing NTD specific mAb K501SP6

Biological Source:

Source Organism:

Severe acute respiratory syndrome coronavirus 2 (Taxon ID: 2697049)
Enterobacteria phage T4 (Taxon ID: 10665)
Homo sapiens (Taxon ID: 9606)

Host Organism:

Homo sapiens

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

3.60 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Spike glycoprotein,Fibritin
Gene (Uniprot):S, wac
Chain IDs:A, B, C
Chain Length:1277
Number of Molecules:3
Biological Source:Severe acute respiratory syndrome coronavirus 2, Enterobacteria phage T4

UniProt ID:P0DTC2,P10104 Pfam ID:PF16451, PF09408, PF19209, PF01601

Polymer Type:polypeptide(L)
Molecule:Fab of neutralizing mAb K501SP6 heavy chain
Chain IDs:D (auth: H)
Chain Length:129
Number of Molecules:1
Biological Source:Homo sapiens

Polymer Type:polypeptide(L)
Molecule:Fab of neutralizing mAb K501SP6 light chain
Chain IDs:E (auth: L)
Chain Length:134
Number of Molecules:1
Biological Source:Homo sapiens

Ligand Molecules

Primary Citation

Omicron BA.1 Spike protein with neutralizing NTD specific mAb K501SP6

Bjoernsson, K.H, Walker, M.R, Raghavan, S.S.R, Ward, A.B, Barfod, L.K.Show

To Be Published ? ? ? (?)

Primary Citation of related structures

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