9FL2 image
Deposition Date 2024-06-04
Release Date 2024-10-30
Last Version Date 2024-11-20
Entry Detail
PDB ID:
9FL2
Keywords:
Title:
Crystal structure of Oscillatoria princeps pyranose oxidase
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.64 Å
R-Value Free:
0.25
R-Value Work:
0.18
R-Value Observed:
0.19
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:pyranose oxidase
Chain IDs:A, B, C, D
Chain Length:539
Number of Molecules:4
Biological Source:Oscillatoria princeps RMCB-10
Primary Citation
Identification of a robust bacterial pyranose oxidase that displays an unusual pH dependence.
J.Biol.Chem. 300 107885 107885 (2024)
PMID: 39395808 DOI: 10.1016/j.jbc.2024.107885

Abstact

Pyranose oxidases are valuable biocatalysts, yet only a handful of bacterial pyranose oxidases are known. These bacterial enzymes exhibit noteworthy distinctions from their extensively characterized fungal counterparts, encompassing variations in substrate specificity and structural attributes. Herein a bacterial pyranose oxidase from Oscillatoria princeps (OPOx) was biochemically characterized in detail. In contrast to the fungal pyranose oxidases, OPOx could be well expressed in Escherichia coli as soluble, fully flavinylated, and active oxidase. It was found to be highly thermostable (melting temperature >90 °C) and showed activity on glucose, exhibiting an exceptionally low KM value (48 μM). Elucidation of its crystal structure revealed similarities with fungal pyranose oxidases, such as being a tetramer with a large central void leading to a narrow substrate access tunnel. In the active site, the FAD cofactor is covalently bound to a histidine. OPOx displays a relatively narrow pH optimum for activity with a sharp decline at relatively basic pH values which is accompanied by a drastic change in its flavin absorbance spectrum. The pH-dependent switch in flavin absorbance features and oxidase activity was shown to be fully reversible. It is hypothesized that a glutamic acid helps to stabilize the protonated form of the histidine that is tethered to the FAD. OPOx presents itself as a valuable biocatalyst as it is highly robust, well-expressed in E. coli, shows low KM values for monosaccharides, and has a peculiar pH-dependent "on-off switch".

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