9FH8 image
Deposition Date 2024-05-26
Release Date 2025-03-26
Last Version Date 2025-04-02
Entry Detail
PDB ID:
9FH8
Keywords:
Title:
Crystal structure of the SPD-2 domain of Apis dorsata CEP192
Biological Source:
Source Organism:
Apis dorsata (Taxon ID: 7462)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.50 Å
R-Value Free:
0.31
R-Value Work:
0.28
R-Value Observed:
0.28
Space Group:
I 41
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Centrosomal protein 192 (CEP192)
Chain IDs:A, B, C, D, E, F, G, H
Chain Length:341
Number of Molecules:8
Biological Source:Apis dorsata
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET modified residue
Ligand Molecules
Primary Citation
The conserved Spd-2/CEP192 domain adopts a unique protein fold to promote centrosome scaffold assembly.
Sci Adv 11 eadr5744 eadr5744 (2025)
PMID: 40106572 DOI: 10.1126/sciadv.adr5744

Abstact

Centrosomes form when centrioles assemble pericentriolar material (PCM) around themselves. Spd-2/CEP192 proteins, defined by a conserved "Spd-2 domain" (SP2D) comprising two closely spaced AspM-Spd-2-Hydin (ASH) domains, play a critical role in centrosome assembly. Here, we show that the SP2D does not target Drosophila Spd-2 to centrosomes but rather promotes PCM scaffold assembly. Crystal structures of the human and honeybee SP2D reveal an unusual "extended cradle" structure mediated by a conserved interaction interface between the two ASH domains. Mutations predicted to perturb this interface, including a human mutation associated with male infertility and Mosaic Variegated Aneuploidy, disrupt PCM scaffold assembly in flies. The SP2D is monomeric in solution, but the Drosophila SP2D can form higher-order oligomers upon phosphorylation by PLK1 (Polo-like kinase 1). Crystal-packing interactions and AlphaFold predictions suggest how SP2Ds might self-assemble, and mutations associated with one such potential dimerization interface markedly perturb SP2D oligomerization in vitro and PCM scaffold assembly in vivo.

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Primary Citation of related structures
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