9FGT image
Deposition Date 2024-05-25
Release Date 2024-06-12
Last Version Date 2024-11-20
Entry Detail
PDB ID:
9FGT
Keywords:
VIRAL PROTEIN
Title:
SARS-CoV-2 (B.1.1.529/Omicron variant) Spike protein in complex with the single chain fragment scFv76 (focused refinement)
Biological Source:
Source Organism:
Severe acute respiratory syndrome coronavirus 2 (Taxon ID: 2697049)
Enterobacteria phage T4 (Taxon ID: 10665)
Homo sapiens (Taxon ID: 9606)
Host Organism:
Homo sapiens
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.80 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
9FGT validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Spike glycoprotein,Fibritin
Gene (Uniprot):S, wac
Chain IDs:A (auth: C)
Chain Length:1214
Number of Molecules:1
Biological Source:Severe acute respiratory syndrome coronavirus 2, Enterobacteria phage T4
UniProt ID:P0DTC2,P10104 Pfam ID:PF16451, PF09408, PF19209, PF01601
Polymer Type:polypeptide(L)
Molecule:Single chain fragment scFv76
Chain IDs:B (auth: E)
Chain Length:264
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
NAG
Primary Citation
Structure of scFv76 in complex with SARS-CoV-2 Omicron Spike protein
To Be Published ? ? ? (?)
Primary Citation of related structures
9FGT