9FDI image
Deposition Date 2024-05-17
Release Date 2024-07-03
Last Version Date 2024-11-20
Entry Detail
PDB ID:
9FDI
Title:
Gcase in complex with small molecule inhibitor 1
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.41 Å
R-Value Free:
0.18
R-Value Work:
0.15
R-Value Observed:
0.15
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Lysosomal acid glucosylceramidase
Gene (Uniprot):GBA1
Chain IDs:A
Chain Length:546
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation

Abstact

β-Glucocerebrosidase (GBA/GCase) mutations leading to misfolded protein cause Gaucher's disease and are a major genetic risk factor for Parkinson's disease and dementia with Lewy bodies. The identification of small molecule pharmacological chaperones that can stabilize the misfolded protein and increase delivery of degradation-prone mutant GCase to the lysosome is a strategy under active investigation. Here, we describe the first use of fragment-based drug discovery (FBDD) to identify pharmacological chaperones of GCase. The fragment hits were identified by using X-ray crystallography and biophysical techniques. This work led to the discovery of a series of compounds that bind GCase with nM potency and positively modulate GCase activity in cells.

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Protein

Chemical

Disease

Primary Citation of related structures
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