9F60 image
Deposition Date 2024-04-30
Release Date 2025-03-12
Last Version Date 2025-04-02
Entry Detail
PDB ID:
9F60
Title:
Structure of the Chlamydomonas reinhardtii respiratory complex IV from respiratory supercomplex
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.39 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Cytochrome c oxidase subunit 1
Gene (Uniprot):COX1
Chain IDs:A (auth: 2A)
Chain Length:505
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:Cytochrome c oxidase polypeptide II
Gene (Uniprot):cox2a
Chain IDs:B (auth: 2B)
Chain Length:284
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:cytochrome-c oxidase
Gene (Uniprot):cox2b
Chain IDs:C (auth: 2C)
Chain Length:153
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:Cytochrome c oxidase subunit 3
Gene (Uniprot):cox3
Chain IDs:D (auth: 2D)
Chain Length:382
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:Cox5b
Gene (Uniprot):CHLRE_13g567600v5
Chain IDs:E (auth: 2E)
Chain Length:175
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:Cox5c
Gene (Uniprot):CHLRE_03g157700v5
Chain IDs:F (auth: 2F)
Chain Length:96
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:Cox6a
Gene (Uniprot):CHLRE_12g537450v5
Chain IDs:G (auth: 2G)
Chain Length:125
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:Cox6b
Gene (Uniprot):CHLRE_06g304350v5
Chain IDs:H (auth: 2H)
Chain Length:148
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:Cox7c
Gene (Uniprot):CHLRE_07g349350v5
Chain IDs:I (auth: 2I)
Chain Length:101
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:Cytochrome c oxidase subunit
Gene (Uniprot):COX90
Chain IDs:J (auth: 2J)
Chain Length:105
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:Cox7a
Gene (Uniprot):CHLRE_12g483850v5
Chain IDs:K (auth: 2K)
Chain Length:58
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:CoxIn
Gene (Uniprot):CHLRE_08g372200v5
Chain IDs:L (auth: 2L)
Chain Length:87
Number of Molecules:1
Biological Source:Chlamydomonas reinhardtii
Primary Citation
In-cell architecture of the mitochondrial respiratory chain.
Science 387 1296 1301 (2025)
PMID: 40112058 DOI: 10.1126/science.ads8738

Abstact

Mitochondria regenerate adenosine triphosphate (ATP) through oxidative phosphorylation. This process is carried out by five membrane-bound complexes collectively known as the respiratory chain, working in concert to transfer electrons and pump protons. The precise organization of these complexes in native cells is debated. We used in situ cryo-electron tomography to visualize the native structures and organization of several major mitochondrial complexes in Chlamydomonas reinhardtii cells. ATP synthases and respiratory complexes segregate into curved and flat crista membrane domains, respectively. Respiratory complexes I, III, and IV assemble into a respirasome supercomplex, from which we determined a native 5-angstrom (Å) resolution structure showing binding of electron carrier cytochrome c. Combined with single-particle cryo-electron microscopy at 2.4-Å resolution, we model how the respiratory complexes organize inside native mitochondria.

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