9F5Z image
Deposition Date 2024-04-30
Release Date 2025-03-12
Last Version Date 2025-04-02
Entry Detail
PDB ID:
9F5Z
Title:
Structure of the Chlamydomonas reinhardtii respiratory complex III from respiratory supercomplex
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.39 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Cytochrome b
Gene (Uniprot):MT-CYB
Chain IDs:A (auth: 1A), B (auth: 1B)
Chain Length:381
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:Cytochrome b-c1 complex subunit Rieske, mitochondrial
Gene (Uniprot):risp
Chain IDs:C (auth: 1C), D (auth: 1D)
Chain Length:262
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:Cytochrome c1
Gene (Uniprot):cyc1
Chain IDs:E (auth: 1E), F (auth: 1F)
Chain Length:314
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:Complex III subunit 9
Gene (Uniprot):CHLRE_11g468950v5
Chain IDs:G (auth: 1G), H (auth: 1H)
Chain Length:60
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:Cytochrome b-c1 complex subunit 6
Chain IDs:I (auth: 1I), J (auth: 1J)
Chain Length:69
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:Mitochondrial ubiquinol-cytochrome c oxidoreductase subunit 8
Gene (Uniprot):CHLRE_03g156950v5
Chain IDs:K (auth: 1K), L (auth: 1L)
Chain Length:73
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:MPP-Beta
Gene (Uniprot):CHLRE_12g523850v5
Chain IDs:M (auth: 1M), N (auth: 1N)
Chain Length:495
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:Mitochondrial ubiquinol-cytochrome c oxidoreductase subunit 10
Gene (Uniprot):CHLRE_09g409150v5
Chain IDs:O (auth: 1O), P (auth: 1P)
Chain Length:59
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:Alpha-MPP
Gene (Uniprot):CHLRE_12g509750v5
Chain IDs:Q (auth: 1Q), S (auth: 1S)
Chain Length:485
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Polymer Type:polypeptide(L)
Molecule:Cytochrome b-c1 complex subunit 7
Gene (Uniprot):CHLRE_06g262700v5
Chain IDs:R (auth: 1R), T (auth: 1T)
Chain Length:123
Number of Molecules:2
Biological Source:Chlamydomonas reinhardtii
Primary Citation
In-cell architecture of the mitochondrial respiratory chain.
Science 387 1296 1301 (2025)
PMID: 40112058 DOI: 10.1126/science.ads8738

Abstact

Mitochondria regenerate adenosine triphosphate (ATP) through oxidative phosphorylation. This process is carried out by five membrane-bound complexes collectively known as the respiratory chain, working in concert to transfer electrons and pump protons. The precise organization of these complexes in native cells is debated. We used in situ cryo-electron tomography to visualize the native structures and organization of several major mitochondrial complexes in Chlamydomonas reinhardtii cells. ATP synthases and respiratory complexes segregate into curved and flat crista membrane domains, respectively. Respiratory complexes I, III, and IV assemble into a respirasome supercomplex, from which we determined a native 5-angstrom (Å) resolution structure showing binding of electron carrier cytochrome c. Combined with single-particle cryo-electron microscopy at 2.4-Å resolution, we model how the respiratory complexes organize inside native mitochondria.

Legend

Protein

Chemical

Disease

Primary Citation of related structures