9F4B image
Entry Detail
PDB ID:
9F4B
EMDB ID:
EMD-50187
Keywords:
VIRUS
Title:
Pre-assembled baseplate cup of Klebsiella phage KP1 variant vB_Kpn_Lilla1
Biological Source:
Source Organism:
Klebsiella phage KP1
PDB Version:
Deposition Date:
2024-04-26
Release Date:
2025-05-14
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.36 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
9F4B validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Description:IraD/Gp25-like domain-containing protein
Chain IDs:GE (auth: AA), HE (auth: AB), IE (auth: AC), JE (auth: AD), KE (auth: AE), LE (auth: AF)
Chain Length:341
Number of Molecules:6
Biological Source:Klebsiella phage KP1
UniProt ID:A0A0K1Y5J2 Pfam ID:PF04965
Protein Blast
Polymer Type:polypeptide(L)
Description:Baseplate wedge subunit
Chain IDs:Y (auth: AH), Z (auth: AJ), AA (auth: AL), BA (auth: AG), CA (auth: AI), DA (auth: AK)
Chain Length:212
Number of Molecules:6
Biological Source:Klebsiella phage KP1
UniProt ID:A0A2K9V5R5 Pfam ID:PF11246
Protein Blast
Polymer Type:polypeptide(L)
Description:Baseplate wedge protein gp6
Chain IDs:A (auth: AT), B (auth: AV), C (auth: AX), D (auth: AS), E (auth: AU), F (auth: AW), G (auth: AN), H (auth: AP), I (auth: AR), J (auth: AM), K (auth: AO), L (auth: AQ)
Chain Length:655
Number of Molecules:12
Biological Source:Klebsiella phage KP1
UniProt ID:A0A2K9V5R4 Pfam ID:PF21379, PF21515, PF21387, PF21871, PF21472
Protein Blast
Polymer Type:polypeptide(L)
Description:Baseplate wedge protein gp7
Chain IDs:IA (auth: AY), JA (auth: A2), KA (auth: AZ), LA (auth: A0), MA (auth: A1), NA (auth: A3)
Chain Length:1032
Number of Molecules:6
Biological Source:Klebsiella phage KP1
UniProt ID:A0A2K9V5T9 Pfam ID:PF21428, PF21427, PF21456
Protein Blast
Polymer Type:polypeptide(L)
Description:Baseplate wedge subunit
Chain IDs:OA (auth: Ad), PA (auth: Ac), QA (auth: Ab), RA (auth: Aa), SA (auth: Ae), TA (auth: Af), UA (auth: A4), VA (auth: A5), WA (auth: A6), XA (auth: A7), YA (auth: A8), ZA (auth: A9)
Chain Length:341
Number of Molecules:12
Biological Source:Klebsiella phage KP1
UniProt ID:A0A2Z4QAY9 Pfam ID:PF09215
Protein Blast
Polymer Type:polypeptide(L)
Description:Phospholipase
Chain IDs:HA (auth: BA)
Chain Length:97
Number of Molecules:1
Biological Source:Klebsiella phage KP1
UniProt ID:A0A2K9V5W6 Pfam ID:PF05488
Protein Blast
Polymer Type:polypeptide(L)
Description:Baseplate central spike protein
Chain IDs:EA (auth: BB), FA (auth: BC), GA (auth: BD)
Chain Length:576
Number of Molecules:3
Biological Source:Klebsiella phage KP1
UniProt ID:A0A976LXP5 Pfam ID:PF06714, PF00959, PF22178
Protein Blast
Polymer Type:polypeptide(L)
Description:Putative baseplate hub subunit
Chain IDs:ME (auth: BE), NE (auth: BF), OE (auth: BG)
Chain Length:380
Number of Molecules:3
Biological Source:Klebsiella phage KP1
UniProt ID:A0A7T3TJP2 Pfam ID:PF09097, PF09096
Protein Blast
Polymer Type:polypeptide(L)
Description:Baseplate hub subunit tail length determinator
Chain IDs:PE (auth: BH), QE (auth: BI), RE (auth: BJ)
Chain Length:577
Number of Molecules:3
Biological Source:Klebsiella phage KP1
UniProt ID:A0A2K9V5Z4
Protein Blast
Polymer Type:polypeptide(L)
Description:Baseplate tail tube cap
Chain IDs:M (auth: BL), N (auth: BN), O (auth: BP), P (auth: BK), Q (auth: BM), R (auth: BO)
Chain Length:350
Number of Molecules:6
Biological Source:Klebsiella phage KP1
UniProt ID:A0A2K9V618 Pfam ID:PF11091
Protein Blast
Polymer Type:polypeptide(L)
Description:Baseplate subunit
Chain IDs:S (auth: BQ), T (auth: BR), U (auth: BS), V (auth: BT), W (auth: BU), X (auth: BV)
Chain Length:308
Number of Molecules:6
Biological Source:Klebsiella phage KP1
UniProt ID:A0A7I8V4E3
Protein Blast
Polymer Type:polypeptide(L)
Description:Tail tube protein
Chain IDs:UD (auth: BW), VD (auth: BX), WD (auth: BY), XD (auth: BZ), YD (auth: B1), ZD (auth: B2), AE (auth: B3), BE (auth: B4), CE (auth: B5), DE (auth: B6), EE (auth: B7), FE (auth: B8)
Chain Length:163
Number of Molecules:12
Biological Source:Klebsiella phage KP1
UniProt ID:A0A2K9V5T6 Pfam ID:PF06841
Protein Blast
Polymer Type:polypeptide(L)
Description:Baseplate wedge protein gp10
Chain IDs:SB (auth: FA), TB (auth: FB), UB (auth: FC), VB (auth: FJ), WB (auth: FK), XB (auth: FL), YB (auth: FS), ZB (auth: FT), AC (auth: FU), BC (auth: Fb), CC (auth: Fc), DC (auth: Fd), EC (auth: Fk), FC (auth: Fl), GC (auth: Fm), HC (auth: Ft), IC (auth: Fu), JC (auth: Fv)
Chain Length:448
Number of Molecules:18
Biological Source:Klebsiella phage KP1
UniProt ID:A0A2K9V5S8 Pfam ID:PF07880, PF22670, PF21939
Protein Blast
Polymer Type:polypeptide(L)
Description:Baseplate wedge subunit and tail pin
Chain IDs:KC (auth: FD), LC (auth: FE), MC (auth: FF), NC (auth: FM), OC (auth: FN), PC (auth: FO), QC (auth: FV), RC (auth: FW), SC (auth: FX), TC (auth: Fe), UC (auth: Ff), VC (auth: Fg), WC (auth: Fn), XC (auth: Fo), YC (auth: Fp), ZC (auth: Fw), AD (auth: Fx), BD (auth: Fy)
Chain Length:607
Number of Molecules:18
Biological Source:Klebsiella phage KP1
UniProt ID:A0A2K9V5T5 Pfam ID:PF08677
Protein Blast
Polymer Type:polypeptide(L)
Description:Gp12 short tail fibers
Chain IDs:CD (auth: FG), DD (auth: FI), ED (auth: FH), FD (auth: FP), GD (auth: FR), HD (auth: FQ), ID (auth: FY), JD (auth: Fa), KD (auth: FZ), LD (auth: Fh), MD (auth: Fj), ND (auth: Fi), OD (auth: Fq), PD (auth: Fs), QD (auth: Fr), RD (auth: Fz), SD (auth: F2), TD (auth: F1)
Chain Length:448
Number of Molecules:18
Biological Source:Klebsiella phage KP1
UniProt ID:A0A7R8MRX7
Protein Blast
Polymer Type:polypeptide(L)
Description:Baseplate wedge tail fiber connector
Chain IDs:AB (auth: LA), BB (auth: LB), CB (auth: LC), DB (auth: LD), EB (auth: LE), FB (auth: LF), GB (auth: LG), HB (auth: LH), IB (auth: LI), JB (auth: LJ), KB (auth: LK), LB (auth: LL), MB (auth: LM), NB (auth: LN), OB (auth: LO), PB (auth: LP), QB (auth: LQ), RB (auth: LR)
Chain Length:303
Number of Molecules:18
Biological Source:Klebsiella phage KP1
UniProt ID:A0A2K9V5S1 Pfam ID:PF07880
Ligand Molecules
CL
K
ZN
Primary Citation
Baseplate cup of Klebsiella phage KP1 variant vB_Kpn_Lilla1
To Be Published ? ? ? (?)
Primary Citation of related structures
9F4B