9F4A image
Entry Detail
PDB ID:
9F4A
EMDB ID:
EMD-50186
Keywords:
VIRUS
Title:
Interface between baseplate cup and extended tail tube/sheath of Klebsiella phage KP1 variant vB_Kpn_Lilla1
Biological Source:
Source Organism:
Klebsiella phage KP1
PDB Version:
Deposition Date:
2024-04-26
Release Date:
2025-05-14
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.95 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
9F4A validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Description:Baseplate wedge subunit
Chain IDs:WA (auth: A4), XA (auth: A9), YA (auth: A6), ZA (auth: A5), AB (auth: A8), BB (auth: A7), CB (auth: Ad), DB (auth: Ac), EB (auth: Af), FB (auth: Ae), GB (auth: Ab), HB (auth: Aa)
Chain Length:341
Number of Molecules:12
Biological Source:Klebsiella phage KP1
UniProt ID:A0A2Z4QAY9 Pfam ID:PF09215
Protein Blast
Polymer Type:polypeptide(L)
Description:IraD/Gp25-like domain-containing protein
Chain IDs:SF (auth: AA), TF (auth: AB), UF (auth: AD), VF (auth: AC), WF (auth: AE), XF (auth: AF)
Chain Length:136
Number of Molecules:6
Biological Source:Klebsiella phage KP1
UniProt ID:A0A0K1Y5J2 Pfam ID:PF04965
Protein Blast
Polymer Type:polypeptide(L)
Description:Baseplate wedge subunit
Chain IDs:BG (auth: AL), CG (auth: AI), DG (auth: AG), EG (auth: AK), FG (auth: AH), GG (auth: AJ)
Chain Length:212
Number of Molecules:6
Biological Source:Klebsiella phage KP1
UniProt ID:A0A2K9V5R5 Pfam ID:PF11246
Protein Blast
Polymer Type:polypeptide(L)
Description:Baseplate wedge protein gp6
Chain IDs:EA (auth: AX), FA (auth: AW), GA (auth: AT), HA (auth: AS), IA (auth: AV), JA (auth: AU), KA (auth: AR), LA (auth: AQ), MA (auth: AN), NA (auth: AM), OA (auth: AP), PA (auth: AO)
Chain Length:655
Number of Molecules:12
Biological Source:Klebsiella phage KP1
UniProt ID:A0A2K9V5R4 Pfam ID:PF21379, PF21515, PF21387, PF21871, PF21472
Protein Blast
Polymer Type:polypeptide(L)
Description:Baseplate wedge protein gp7
Chain IDs:QA (auth: AY), RA (auth: AZ), SA (auth: A0), TA (auth: A1), UA (auth: A2), VA (auth: A3)
Chain Length:1032
Number of Molecules:6
Biological Source:Klebsiella phage KP1
UniProt ID:A0A2K9V5T9 Pfam ID:PF21428, PF21427, PF21456
Protein Blast
Polymer Type:polypeptide(L)
Description:Baseplate central spike protein
Chain IDs:HG (auth: BB), IG (auth: BC), JG (auth: BD)
Chain Length:576
Number of Molecules:3
Biological Source:Klebsiella phage KP1
UniProt ID:A0A976LXP5 Pfam ID:PF06714, PF00959, PF22178
Protein Blast
Polymer Type:polypeptide(L)
Description:Putative baseplate hub subunit
Chain IDs:YF (auth: BE), ZF (auth: BF), AG (auth: BG)
Chain Length:380
Number of Molecules:3
Biological Source:Klebsiella phage KP1
UniProt ID:A0A7T3TJP2 Pfam ID:PF09097, PF09096
Protein Blast
Polymer Type:polypeptide(L)
Description:Baseplate tail tube cap
Chain IDs:S (auth: BM), T (auth: BK), U (auth: BO), V (auth: BP), W (auth: BL), X (auth: BN)
Chain Length:350
Number of Molecules:6
Biological Source:Klebsiella phage KP1
UniProt ID:A0A2K9V618 Pfam ID:PF11091
Protein Blast
Polymer Type:polypeptide(L)
Description:Baseplate subunit
Chain IDs:Y (auth: BQ), Z (auth: BV), AA (auth: BS), BA (auth: BR), CA (auth: BT), DA (auth: BU)
Chain Length:308
Number of Molecules:6
Biological Source:Klebsiella phage KP1
UniProt ID:A0A7I8V4E3
Protein Blast
Polymer Type:polypeptide(L)
Description:Baseplate wedge protein gp10
Chain IDs:AC (auth: FA), BC (auth: FB), CC (auth: FC), DC (auth: FJ), EC (auth: FK), FC (auth: FL), GC (auth: FS), HC (auth: FT), IC (auth: FU), JC (auth: Fb), KC (auth: Fc), LC (auth: Fd), MC (auth: Fk), NC (auth: Fl), OC (auth: Fm), PC (auth: Ft), QC (auth: Fu), RC (auth: Fv)
Chain Length:607
Number of Molecules:18
Biological Source:Klebsiella phage KP1
UniProt ID:A0A2K9V5S8 Pfam ID:PF07880, PF22670, PF21939
Protein Blast
Polymer Type:polypeptide(L)
Description:Baseplate wedge tail fiber connector
Chain IDs:IB (auth: LN), JB (auth: LO), KB (auth: LM), LB (auth: LQ), MB (auth: LR), NB (auth: LP), OB (auth: LB), PB (auth: LC), QB (auth: LA), RB (auth: LE), SB (auth: LF), TB (auth: LD), UB (auth: LH), VB (auth: LI), WB (auth: LG), XB (auth: LK), YB (auth: LL), ZB (auth: LJ)
Chain Length:303
Number of Molecules:18
Biological Source:Klebsiella phage KP1
UniProt ID:A0A2K9V5S1 Pfam ID:PF07880
Protein Blast
Polymer Type:polypeptide(L)
Description:Long tail fiber proximal subunit
Chain IDs:A (auth: Le), B (auth: Lf), C (auth: Lg), D (auth: Lh), E (auth: Li), F (auth: Lj), G (auth: LS), H (auth: LT), I (auth: LU), J (auth: LV), K (auth: LW), L (auth: LX), M (auth: LY), N (auth: LZ), O (auth: La), P (auth: Lb), Q (auth: Lc), R (auth: Ld)
Chain Length:303
Number of Molecules:18
Biological Source:Klebsiella phage KP1
UniProt ID:A0A5B9NKG2 Pfam ID:PF21560
Protein Blast
Polymer Type:polypeptide(L)
Description:Tail sheath protein
Chain IDs:SC (auth: SA), TC (auth: SB), UC (auth: SC), VC (auth: SD), WC (auth: SE), XC (auth: SF), YC (auth: SK), ZC (auth: SG), AD (auth: SL), BD (auth: SH), CD (auth: SI), DD (auth: SJ), ED (auth: SQ), FD (auth: SP), GD (auth: SM), HD (auth: SN), ID (auth: SO), JD (auth: SR), KD (auth: SW), LD (auth: SS), MD (auth: ST), ND (auth: SU), OD (auth: SV), PD (auth: SX), QD (auth: SY), RD (auth: SZ), SD (auth: Sa), TD (auth: Sb), UD (auth: Sc), VD (auth: Sd), WD (auth: Se), XD (auth: Sf), YD (auth: Sg), ZD (auth: Sh), AE (auth: Si), BE (auth: Sj), CE (auth: Sk), DE (auth: Sl), EE (auth: Sm), FE (auth: Sn), GE (auth: So), HE (auth: Sp)
Chain Length:656
Number of Molecules:42
Biological Source:Klebsiella phage KP1
UniProt ID:A0A2K9V5S7 Pfam ID:PF22671, PF22639, PF17481, PF04984, PF17482
Protein Blast
Polymer Type:polypeptide(L)
Description:Tail tube protein
Chain IDs:IE (auth: TM), JE (auth: TN), KE (auth: TO), LE (auth: TP), ME (auth: TQ), NE (auth: TR), OE (auth: TW), PE (auth: TS), QE (auth: TT), RE (auth: TU), SE (auth: TV), TE (auth: TX), UE (auth: TY), VE (auth: TZ), WE (auth: Ta), XE (auth: Tb), YE (auth: Tc), ZE (auth: Td), AF (auth: Te), BF (auth: Tf), CF (auth: Tg), DF (auth: Th), EF (auth: Ti), FF (auth: Tj), GF (auth: Tk), HF (auth: Tl), IF (auth: Tm), JF (auth: Tn), KF (auth: To), LF (auth: Tp), MF (auth: Tq), NF (auth: Tr), OF (auth: Ts), PF (auth: Tt), QF (auth: Tu), RF (auth: Tv)
Chain Length:163
Number of Molecules:36
Biological Source:Klebsiella phage KP1
UniProt ID:A0A2K9V5T6 Pfam ID:PF06841
Ligand Molecules
CL
Primary Citation
Baseplate cup of Klebsiella phage KP1 variant vB_Kpn_Lilla1
To Be Published ? ? ? (?)
Primary Citation of related structures
9F4A