9EZ2 image
Entry Detail
PDB ID:
9EZ2
Keywords:
Title:
Vitamin D receptor complex with 1,4b,25-trihydroxyvitamin D3
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2024-04-10
Release Date:
2024-06-19
Method Details:
Experimental Method:
Resolution:
1.80 Å
R-Value Free:
0.23
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 65 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Vitamin D3 receptor A
Chain IDs:A
Chain Length:302
Number of Molecules:1
Biological Source:Danio rerio
Polymer Type:polypeptide(L)
Description:Nuclear receptor coactivator 2
Chain IDs:B
Chain Length:13
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
4-Hydroxy-1 alpha ,25-Dihydroxyvitamin D 3 : Synthesis and Structure-Function Study.
Biomolecules 14 ? ? (2024)
PMID: 38785958 DOI: 10.3390/biom14050551

Abstact

The active vitamin D metabolites, 25-hydroxyvitamin D3 (25D3) and 1,25-dihydroxyvitamin D3 (1,25D3), are produced by successive hydroxylation steps and play key roles in several cellular processes. However, alternative metabolic pathways exist, and among them, the 4-hydroxylation of 25D3 is a major one. This study aims to investigate the structure-activity relationships of 4-hydroxy derivatives of 1,25D3. Structural analysis indicates that 1,4α,25(OH)3D3 and 1,4β,25(OH)3D3 maintain the anchoring hydrogen bonds of 1,25D3 and form additional interactions, stabilizing the active conformation of VDR. In addition, 1,4α,25D3 and 1,4β,25D3 are as potent as 1,25D3 in regulating the expression of VDR target genes in rat intestinal epithelial cells and in the mouse kidney. Moreover, these two 4-hydroxy derivatives promote hypercalcemia in mice at a dose similar to that of the parent compound.

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