9EXN image
Deposition Date 2024-04-08
Release Date 2025-11-26
Last Version Date 2025-11-26
Entry Detail
PDB ID:
9EXN
Keywords:
TRANSCRIPTION
Title:
The vaccinia minimal RNA polymerase cryo EM structure at 1.9A resolution
Biological Source:
Source Organism:
Orthopoxvirus vaccinia (Taxon ID: 10245)
Host Organism:
Orthopoxvirus vaccinia
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
1.89 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
9EXN validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerase 147 kDa polypeptide
Gene (Uniprot):OPG105
Chain IDs:A
Chain Length:1286
Number of Molecules:1
Biological Source:Orthopoxvirus vaccinia
UniProt ID:P20504 Pfam ID:PF04997, PF00623, PF04983, PF05000, PF04998
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerase 133 kDa polypeptide
Gene (Uniprot):OPG151
Chain IDs:B
Chain Length:1164
Number of Molecules:1
Biological Source:Orthopoxvirus vaccinia
UniProt ID:P68694 Pfam ID:PF12415, PF04565, PF04567, PF00562, PF04560
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerase 35 kDa subunit
Gene (Uniprot):OPG156
Chain IDs:C
Chain Length:305
Number of Molecules:1
Biological Source:Orthopoxvirus vaccinia
UniProt ID:P21087 Pfam ID:PF03396
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerase 22 kDa subunit
Gene (Uniprot):OPG103
Chain IDs:D (auth: E)
Chain Length:186
Number of Molecules:1
Biological Source:Orthopoxvirus vaccinia
UniProt ID:P68608 Pfam ID:PF05273
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerase 19 kDa subunit
Gene (Uniprot):OPG131
Chain IDs:E (auth: F)
Chain Length:164
Number of Molecules:1
Biological Source:Orthopoxvirus vaccinia
UniProt ID:P68610 Pfam ID:PF05320
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerase 18 kDa subunit
Gene (Uniprot):OPG119
Chain IDs:F (auth: G)
Chain Length:161
Number of Molecules:1
Biological Source:Orthopoxvirus vaccinia
UniProt ID:P21034 Pfam ID:PF03293
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerase 7 kDa subunit
Gene (Uniprot):OPG090
Chain IDs:G (auth: J)
Chain Length:63
Number of Molecules:1
Biological Source:Orthopoxvirus vaccinia
UniProt ID:P68315 Pfam ID:PF05864
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:DNA-directed RNA polymerase 30 kDa polypeptide
Gene (Uniprot):OPG066
Chain IDs:H (auth: S)
Chain Length:259
Number of Molecules:1
Biological Source:Orthopoxvirus vaccinia
UniProt ID:P21082 Pfam ID:PF12410, PF01096
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
SEP H SER modified residue
Ligand Molecules
MG
ZN
Primary Citation
The vaccinia minimal RNA polymerase cryo EM structure at 1.9A resolution
To Be Published ? ? ? (?)
Primary Citation of related structures
9EXN
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