9EXI image
Entry Detail
PDB ID:
9EXI
EMDB ID:
Keywords:
Title:
Coxsackievirus A9 bound with compound 14 (CL275)
Biological Source:
PDB Version:
Deposition Date:
2024-04-08
Release Date:
2024-10-02
Method Details:
Experimental Method:
Resolution:
2.31 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Capsid protein VP1
Chain IDs:A
Chain Length:283
Number of Molecules:1
Biological Source:Human coxsackievirus A9 (strain Griggs)
Polymer Type:polypeptide(L)
Description:Capsid protein VP2
Chain IDs:B
Chain Length:251
Number of Molecules:1
Biological Source:Human coxsackievirus A9 (strain Griggs)
Polymer Type:polypeptide(L)
Description:Capsid protein VP3
Chain IDs:C
Chain Length:238
Number of Molecules:1
Biological Source:Human coxsackievirus A9 (strain Griggs)
Polymer Type:polypeptide(L)
Description:Capsid protein VP4
Chain IDs:D
Chain Length:68
Number of Molecules:1
Biological Source:Human coxsackievirus A9 (strain Griggs)
Primary Citation

Abstact

Enterovirus infections are common in humans, yet there are no approved antiviral treatments. In this study we concentrated on inhibition of one of the Enterovirus B (EV-B), namely Coxsackievirus A9 (CVA9), using a combination of medicinal chemistry, virus inhibition assays, structure determination from cryogenic electron microscopy and molecular modeling, to determine the structure activity relationships for a promising class of novel N-phenylbenzylamines. Of the new 29 compounds synthesized, 10 had half maximal effective concentration (EC50) values between 0.64-10.46 μM, and of these, 7 had 50% cytotoxicity concentration (CC50) values higher than 200 μM. In addition, this new series of compounds showed promising physicochemical properties and act through capsid stabilization, preventing capsid expansion and subsequent release of the genome.

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Disease

Primary Citation of related structures