ISDA

Deposition Date 2024-03-27

Release Date 2025-04-09

Last Version Date 2025-04-09

Entry Detail

PDB ID:

9EUG

Keywords:

VIRUS

Title:

Cryo-EM structure of Staphylococcus aureus bacteriophage phi812 baseplate in the pre-contraction state - core, wedge module, and proximal tail proteins

Biological Source:

Source Organism:

Staphylococcus phage 812 (Taxon ID: 307898)

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

4.50 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:NlpC/P60 domain-containing protein
Gene (Uniprot):812_114, 812a_114, 812F1_114, K1/420_114, K1_114
Chain IDs:A
Chain Length:295
Number of Molecules:1
Biological Source:Staphylococcus phage 812

UniProt ID:A0A0U1UXW0

Protein Blast

Polymer Type:polypeptide(L)
Molecule:GP-PDE domain-containing protein
Gene (Uniprot):812_115, 812a_115, 812F1_115, K1/420_115, K1_115
Chain IDs:B
Chain Length:848
Number of Molecules:1
Biological Source:Staphylococcus phage 812

UniProt ID:A0A0U1WFD7 Pfam ID:PF03009

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Baseplate component
Chain IDs:C, D, I, K
Chain Length:348
Number of Molecules:4
Biological Source:Staphylococcus phage 812

UniProt ID:Q4Z9Z9

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Peptidase C51 domain-containing protein
Gene (Uniprot):812_113, 812a_113, 812F1_113, K1/420_113, K1_113
Chain IDs:E
Chain Length:808
Number of Molecules:1
Biological Source:Staphylococcus phage 812

UniProt ID:A0A0U1X189 Pfam ID:PF05257

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Baseplate component
Gene (Uniprot):812_117, 812a_117, 812F1_117, K1/420_117, K1_117
Chain IDs:F, G
Chain Length:174
Number of Molecules:2
Biological Source:Staphylococcus phage 812

UniProt ID:A0A0U1UXD6

Protein Blast

Polymer Type:polypeptide(L)
Molecule:TmpF
Gene (Uniprot):812a_120, 812F1_120, K1_120
Chain IDs:H, J
Chain Length:1019
Number of Molecules:2
Biological Source:Staphylococcus phage 812

UniProt ID:A0A0U1WGD3

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Baseplate wedge subunit
Chain IDs:L, O
Chain Length:234
Number of Molecules:2
Biological Source:Staphylococcus phage 812

UniProt ID:Q4ZA00

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Putative baseplate component
Chain IDs:M, N
Chain Length:263
Number of Molecules:2
Biological Source:Staphylococcus phage 812

UniProt ID:Q4ZA02

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Major tail sheath protein
Gene (Uniprot):812a_103, 812F1_103, K1/420_103, K1_103
Chain IDs:P, Q, T, U, X, Y
Chain Length:587
Number of Molecules:6
Biological Source:Staphylococcus phage 812

UniProt ID:A0A0U1WZ79

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Capsid protein
Chain IDs:R, S, V, W, Z, AA (auth: a)
Chain Length:295
Number of Molecules:6
Biological Source:Staphylococcus phage 812

UniProt ID:Q4ZA15

Primary Citation

Cell attachment and tail contraction of S. aureus phage phi812

Binovsky, J, Siborova, M, Baska, R, Pichel-Beleiro, A, Skubnik, K, Novacek, J, van Raaij, M.J, Plevka, P.Show

To Be Published ? ? ? (?)

Primary Citation of related structures