9EKD image
Deposition Date 2024-12-02
Release Date 2025-02-12
Last Version Date 2025-02-12
Entry Detail
PDB ID:
9EKD
Keywords:
IMMUNE SYSTEM,HYDROLASE
Title:
Structure of a C1r Zymogen Fragment Bound to SALO
Biological Source:
Source Organism:
Lutzomyia longipalpis (Taxon ID: 7200)
Homo sapiens (Taxon ID: 9606)
Host Organism:
Homo sapiens
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
3.28 Å
R-Value Free:
0.28
R-Value Work:
0.24
R-Value Observed:
0.24
Space Group:
P 32 2 1
9EKD validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Salivary anti-complement protein
Chain IDs:A, C (auth: B)
Chain Length:104
Number of Molecules:2
Biological Source:Lutzomyia longipalpis
UniProt ID:Q5WPZ4
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Complement C1r subcomponent
Gene (Uniprot):C1R
Mutations:S654A
Chain IDs:B (auth: C), D
Chain Length:409
Number of Molecules:2
Biological Source:Homo sapiens
UniProt ID:P00736 Pfam ID:PF00084, PF00089 EC:3.4.21.41
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
TYS A TYR modified residue
Ligand Molecules
NA
Primary Citation
Complement Evasion by Blocking Activation of the C1r Zymogen
To Be Published ? ? ? (?)
Primary Citation of related structures
9EKD