9ECP image
Deposition Date 2024-11-14
Release Date 2025-10-22
Last Version Date 2025-10-22
Entry Detail
PDB ID:
9ECP
Keywords:
DNA BINDING PROTEIN/DNA
Title:
Structure of the native human NCP purified from HEK293 cells
Biological Source:
Source Organism(s):
Homo sapiens (Taxon ID: 9606)
Expression System(s):
Homo sapiens
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
1.91 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
9ECP validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Histone H3.1
Gene (Uniprot):H3C1, H3C2, H3C3, H3C4, H3C6, H3C7, H3C8, H3C10, H3C11, H3C12
Chain IDs:A, E
Chain Length:96
Number of Molecules:2
Biological Source:Homo sapiens
UniProt ID:P68431 Pfam ID:PF00125
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Histone H4
Gene (Uniprot):H4C1, H4C2, H4C3, H4C4, H4C5, H4C6, H4C8, H4C9, H4C11, H4C12, H4C13, H4C14, H4C15, H4C16
Chain IDs:B, F
Chain Length:82
Number of Molecules:2
Biological Source:Homo sapiens
UniProt ID:P62805 Pfam ID:PF15511
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Histone H2A type 3
Gene (Uniprot):H2AC25
Chain IDs:C, G
Chain Length:109
Number of Molecules:2
Biological Source:Homo sapiens
UniProt ID:Q7L7L0 Pfam ID:PF00125, PF16211
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Histone H2B type 1-K
Gene (Uniprot):H2BC12
Chain IDs:D, H
Chain Length:94
Number of Molecules:2
Biological Source:Homo sapiens
UniProt ID:O60814 Pfam ID:PF00125
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (145-MER)
Chain IDs:I, J
Chain Length:145
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
The structure and composition of native human nucleosomes
Biorxiv ? ? ? (2025)
DOI: 10.1101/2025.10.10.681767
Primary Citation of related structures
9ECP
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